Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.5■□□□□ 0.07
PPP3CBP16298 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.5■□□□□ 0.07
PPP3CBP16298 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
PPP3CBP16298 AC139887.3-201ENST00000568585 713 ntBASIC15.5■□□□□ 0.07
PPP3CBP16298 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC15.5■□□□□ 0.07
PPP3CBP16298 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PPP3CBP16298 AC117500.6-201ENST00000624871 588 ntBASIC15.5■□□□□ 0.07
PPP3CBP16298 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
PPP3CBP16298 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 OR6D1P-203ENST00000641209 4860 ntBASIC15.5■□□□□ 0.07
PPP3CBP16298 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
PPP3CBP16298 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.5■□□□□ 0.07
PPP3CBP16298 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PPP3CBP16298 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PPP3CBP16298 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PPP3CBP16298 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.49■□□□□ 0.07
PPP3CBP16298 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 PMS2P1-201ENST00000431037 1228 ntBASIC15.49■□□□□ 0.07
PPP3CBP16298 AP000347.1-202ENST00000435868 847 ntBASIC15.49■□□□□ 0.07
PPP3CBP16298 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.49■□□□□ 0.07
PPP3CBP16298 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.49■□□□□ 0.07
PPP3CBP16298 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.49■□□□□ 0.07
PPP3CBP16298 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.49■□□□□ 0.07
PPP3CBP16298 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.49■□□□□ 0.07
PPP3CBP16298 AP000867.4-201ENST00000641616 219 ntBASIC15.49■□□□□ 0.07
PPP3CBP16298 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 AL121761.2-201ENST00000598007 1648 ntBASIC15.49■□□□□ 0.07
PPP3CBP16298 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.49■□□□□ 0.07
PPP3CBP16298 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PPP3CBP16298 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.48■□□□□ 0.07
PPP3CBP16298 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
PPP3CBP16298 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.48■□□□□ 0.07
PPP3CBP16298 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PPP3CBP16298 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
PPP3CBP16298 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
PPP3CBP16298 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
PPP3CBP16298 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
PPP3CBP16298 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.48■□□□□ 0.07
PPP3CBP16298 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms