Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 CDK2AP2P3-201ENST00000422476 372 ntBASIC19.52■□□□□ 0.72
PTPRFP10586 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPRFP10586 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.52■□□□□ 0.72
PTPRFP10586 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.52■□□□□ 0.72
PTPRFP10586 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.52■□□□□ 0.72
PTPRFP10586 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PTPRFP10586 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.52■□□□□ 0.72
PTPRFP10586 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.52■□□□□ 0.72
PTPRFP10586 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPRFP10586 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPRFP10586 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.52■□□□□ 0.71
PTPRFP10586 LINC00896-202ENST00000609602 2128 ntBASIC19.52■□□□□ 0.71
PTPRFP10586 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
PTPRFP10586 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPRFP10586 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPRFP10586 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
PTPRFP10586 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPRFP10586 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPRFP10586 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.51■□□□□ 0.71
PTPRFP10586 NAA50-208ENST00000497255 789 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPRFP10586 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.51■□□□□ 0.71
PTPRFP10586 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTPRFP10586 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPRFP10586 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.51■□□□□ 0.71
PTPRFP10586 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPRFP10586 AC073389.1-201ENST00000595595 795 ntBASIC19.51■□□□□ 0.71
PTPRFP10586 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.51■□□□□ 0.71
PTPRFP10586 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.51■□□□□ 0.71
PTPRFP10586 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPRFP10586 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.5■□□□□ 0.71
PTPRFP10586 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPRFP10586 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPRFP10586 FAM220BP-201ENST00000377689 816 ntBASIC19.5■□□□□ 0.71
PTPRFP10586 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPRFP10586 GAPDHP21-201ENST00000450301 1010 ntBASIC19.5■□□□□ 0.71
PTPRFP10586 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 AC007967.4-201ENST00000614700 386 ntBASIC19.5■□□□□ 0.71
PTPRFP10586 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
PTPRFP10586 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
PTPRFP10586 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.5■□□□□ 0.71
PTPRFP10586 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPRFP10586 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.49■□□□□ 0.71
PTPRFP10586 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.49■□□□□ 0.71
PTPRFP10586 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPRFP10586 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPRFP10586 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 INGX-202ENST00000489074 768 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PTPRFP10586 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPRFP10586 IGHV3-62-201ENST00000520057 340 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPRFP10586 MIR4492-201ENST00000581627 80 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPRFP10586 CYP2A7P1-201ENST00000595391 815 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 FRMD8P1-201ENST00000440433 1524 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 AP3S2-216ENST00000617003 1561 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.49■□□□□ 0.71
PTPRFP10586 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
PTPRFP10586 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PTPRFP10586 AC116353.5-201ENST00000638148 1699 ntBASIC19.49■□□□□ 0.71
PTPRFP10586 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPRFP10586 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.49■□□□□ 0.71
PTPRFP10586 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.49■□□□□ 0.71
PTPRFP10586 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms