Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 KRT8P23-201ENST00000560090 1207 ntBASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 MIR6080-201ENST00000617359 66 ntBASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
CSB-PGBD3P0DP91 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 LINC01451-201ENST00000623792 534 ntBASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 AC008761.3-201ENST00000624803 892 ntBASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CSB-PGBD3P0DP91 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC22.66■■□□□ 1.22
CSB-PGBD3P0DP91 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 GK-202ENST00000378941 458 ntTSL 3 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 FAM207CP-201ENST00000443486 507 ntBASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 CCDC74BP1-201ENST00000508880 1123 ntBASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CSB-PGBD3P0DP91 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CSB-PGBD3P0DP91 AC138028.4-201ENST00000564984 1845 ntBASIC22.64■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms