Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 DFFB-203ENST00000341385 572 ntTSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 IGHV3-47-201ENST00000425060 335 ntBASIC15.32■□□□□ 0.04
ERCC1P07992 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 AC096582.2-201ENST00000510860 516 ntBASIC15.32■□□□□ 0.04
ERCC1P07992 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC1P07992 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC1P07992 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC1P07992 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 AL732292.2-201ENST00000609649 430 ntBASIC15.32■□□□□ 0.04
ERCC1P07992 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 REXO1L11P-201ENST00000620964 1927 ntBASIC15.32■□□□□ 0.04
ERCC1P07992 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.32■□□□□ 0.04
ERCC1P07992 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 BX276092.7-203ENST00000637198 1536 ntBASIC15.32■□□□□ 0.04
ERCC1P07992 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.32■□□□□ 0.04
ERCC1P07992 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ERCC1P07992 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
ERCC1P07992 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC1P07992 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
ERCC1P07992 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC1P07992 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC1P07992 AC009533.2-201ENST00000543664 586 ntBASIC15.31■□□□□ 0.04
ERCC1P07992 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.31■□□□□ 0.04
ERCC1P07992 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC15.31■□□□□ 0.04
ERCC1P07992 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.31■□□□□ 0.04
ERCC1P07992 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.31■□□□□ 0.04
ERCC1P07992 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.31■□□□□ 0.04
ERCC1P07992 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ERCC1P07992 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC1P07992 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
ERCC1P07992 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC1P07992 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.3■□□□□ 0.04
ERCC1P07992 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ERCC1P07992 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.3■□□□□ 0.04
ERCC1P07992 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.3■□□□□ 0.04
ERCC1P07992 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.3■□□□□ 0.04
ERCC1P07992 AC064862.7-201ENST00000604520 867 ntBASIC15.3■□□□□ 0.04
ERCC1P07992 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 AL353801.3-201ENST00000609898 542 ntBASIC15.3■□□□□ 0.04
ERCC1P07992 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.3■□□□□ 0.04
ERCC1P07992 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ERCC1P07992 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.3■□□□□ 0.04
ERCC1P07992 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms