Protein–RNA interactions for Protein: P07942

LAMB1, Laminin subunit beta-1, humanhuman

Predictions only

Length 1,786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1P07942 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMB1P07942 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.21■□□□□ 0.83
LAMB1P07942 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
LAMB1P07942 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.21■□□□□ 0.83
LAMB1P07942 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LAMB1P07942 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
LAMB1P07942 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC20.21■□□□□ 0.83
LAMB1P07942 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMB1P07942 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.21■□□□□ 0.83
LAMB1P07942 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.21■□□□□ 0.83
LAMB1P07942 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LAMB1P07942 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LAMB1P07942 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
LAMB1P07942 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.21■□□□□ 0.83
LAMB1P07942 AC069335.1-201ENST00000489972 472 ntBASIC20.21■□□□□ 0.83
LAMB1P07942 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.21■□□□□ 0.83
LAMB1P07942 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
LAMB1P07942 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
LAMB1P07942 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
LAMB1P07942 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB1P07942 PI4KAP1-204ENST00000612579 1703 ntBASIC20.2■□□□□ 0.82
LAMB1P07942 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB1P07942 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMB1P07942 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMB1P07942 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
LAMB1P07942 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMB1P07942 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB1P07942 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMB1P07942 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.2■□□□□ 0.82
LAMB1P07942 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LAMB1P07942 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC20.2■□□□□ 0.82
LAMB1P07942 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LAMB1P07942 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.2■□□□□ 0.82
LAMB1P07942 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
LAMB1P07942 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.19■□□□□ 0.82
LAMB1P07942 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC20.19■□□□□ 0.82
LAMB1P07942 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMB1P07942 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.19■□□□□ 0.82
LAMB1P07942 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.19■□□□□ 0.82
LAMB1P07942 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
LAMB1P07942 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.19■□□□□ 0.82
LAMB1P07942 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LAMB1P07942 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB1P07942 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB1P07942 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMB1P07942 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMB1P07942 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB1P07942 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 AC141586.5-201ENST00000624546 2050 ntBASIC20.18■□□□□ 0.82
LAMB1P07942 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 AC139713.2-201ENST00000641328 2723 ntBASIC20.18■□□□□ 0.82
LAMB1P07942 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB1P07942 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB1P07942 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.18■□□□□ 0.82
LAMB1P07942 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.18■□□□□ 0.82
LAMB1P07942 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.18■□□□□ 0.82
LAMB1P07942 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LAMB1P07942 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LAMB1P07942 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LAMB1P07942 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMB1P07942 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMB1P07942 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LAMB1P07942 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.17■□□□□ 0.82
LAMB1P07942 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LAMB1P07942 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms