Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 MIR3909-201ENST00000579518 119 ntBASIC18.08■□□□□ 0.48
RB1P06400 AC027307.2-201ENST00000591252 911 ntBASIC18.08■□□□□ 0.48
RB1P06400 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.08■□□□□ 0.48
RB1P06400 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
RB1P06400 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
RB1P06400 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.08■□□□□ 0.48
RB1P06400 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RB1P06400 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.08■□□□□ 0.48
RB1P06400 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.07■□□□□ 0.48
RB1P06400 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
RB1P06400 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.48
RB1P06400 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RB1P06400 PIN1P1-201ENST00000412108 996 ntBASIC18.07■□□□□ 0.48
RB1P06400 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RB1P06400 AC004890.2-204ENST00000481968 304 ntBASIC18.07■□□□□ 0.48
RB1P06400 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.07■□□□□ 0.48
RB1P06400 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.07■□□□□ 0.48
RB1P06400 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.07■□□□□ 0.48
RB1P06400 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RB1P06400 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.07■□□□□ 0.48
RB1P06400 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
RB1P06400 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
RB1P06400 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RB1P06400 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.07■□□□□ 0.48
RB1P06400 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.06■□□□□ 0.48
RB1P06400 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RB1P06400 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RB1P06400 AC009118.2-201ENST00000613275 655 ntBASIC18.06■□□□□ 0.48
RB1P06400 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RB1P06400 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.06■□□□□ 0.48
RB1P06400 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
RB1P06400 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.05■□□□□ 0.48
RB1P06400 AC004408.2-201ENST00000623613 2777 ntBASIC18.05■□□□□ 0.48
RB1P06400 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.05■□□□□ 0.48
RB1P06400 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.05■□□□□ 0.48
RB1P06400 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.05■□□□□ 0.48
RB1P06400 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.05■□□□□ 0.48
RB1P06400 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.05■□□□□ 0.48
RB1P06400 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.05■□□□□ 0.48
RB1P06400 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
RB1P06400 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
RB1P06400 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
RB1P06400 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RB1P06400 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms