Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 GNAS-203ENST00000306120 1878 ntBASIC18.79■□□□□ 0.6
VTNP04004 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.79■□□□□ 0.6
VTNP04004 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
VTNP04004 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.79■□□□□ 0.6
VTNP04004 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
VTNP04004 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 SLC25A1P3-201ENST00000395415 828 ntBASIC18.78■□□□□ 0.6
VTNP04004 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.78■□□□□ 0.6
VTNP04004 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.78■□□□□ 0.6
VTNP04004 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.78■□□□□ 0.6
VTNP04004 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VTNP04004 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VTNP04004 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.78■□□□□ 0.6
VTNP04004 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
VTNP04004 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
VTNP04004 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
VTNP04004 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 KRT18P28-201ENST00000453838 1332 ntBASIC18.77■□□□□ 0.6
VTNP04004 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 METTL21AP1-201ENST00000438852 635 ntBASIC18.77■□□□□ 0.6
VTNP04004 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.77■□□□□ 0.6
VTNP04004 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.77■□□□□ 0.6
VTNP04004 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 REXO1L3P-201ENST00000622202 1288 ntBASIC18.77■□□□□ 0.6
VTNP04004 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.77■□□□□ 0.6
VTNP04004 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.77■□□□□ 0.6
VTNP04004 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VTNP04004 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VTNP04004 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VTNP04004 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VTNP04004 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.77■□□□□ 0.59
VTNP04004 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.77■□□□□ 0.59
VTNP04004 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
VTNP04004 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
VTNP04004 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VTNP04004 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
VTNP04004 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
VTNP04004 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
VTNP04004 EGFEM1P-202ENST00000431685 1563 ntBASIC18.76■□□□□ 0.59
VTNP04004 AC068880.1-201ENST00000507289 2297 ntBASIC18.76■□□□□ 0.59
VTNP04004 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VTNP04004 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.76■□□□□ 0.59
VTNP04004 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VTNP04004 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
VTNP04004 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.76■□□□□ 0.59
VTNP04004 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
VTNP04004 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms