Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
LMNAP02545 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.03■□□□□ 0.48
LMNAP02545 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LMNAP02545 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.03■□□□□ 0.48
LMNAP02545 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LMNAP02545 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 BCRP1-201ENST00000444246 691 ntBASIC18.03■□□□□ 0.48
LMNAP02545 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 ALG1L5P-201ENST00000482043 771 ntBASIC18.03■□□□□ 0.48
LMNAP02545 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.03■□□□□ 0.48
LMNAP02545 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
LMNAP02545 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
LMNAP02545 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LMNAP02545 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 AC002310.6-201ENST00000624451 1377 ntBASIC18.03■□□□□ 0.48
LMNAP02545 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LMNAP02545 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LMNAP02545 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LMNAP02545 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LMNAP02545 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LMNAP02545 LAGE3P1-201ENST00000425356 484 ntBASIC18.02■□□□□ 0.48
LMNAP02545 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.02■□□□□ 0.48
LMNAP02545 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.02■□□□□ 0.48
LMNAP02545 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.02■□□□□ 0.48
LMNAP02545 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.02■□□□□ 0.48
LMNAP02545 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LMNAP02545 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.02■□□□□ 0.48
LMNAP02545 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.47
LMNAP02545 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.02■□□□□ 0.47
LMNAP02545 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LMNAP02545 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LMNAP02545 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LMNAP02545 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LMNAP02545 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
LMNAP02545 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LMNAP02545 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
LMNAP02545 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.01■□□□□ 0.47
LMNAP02545 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.01■□□□□ 0.47
LMNAP02545 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.01■□□□□ 0.47
LMNAP02545 NKAPP1-205ENST00000585790 367 ntBASIC18.01■□□□□ 0.47
LMNAP02545 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 C20orf181-201ENST00000623918 480 ntBASIC18.01■□□□□ 0.47
LMNAP02545 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LMNAP02545 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.01■□□□□ 0.47
LMNAP02545 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.01■□□□□ 0.47
LMNAP02545 AC011676.5-201ENST00000624864 2660 ntBASIC18.01■□□□□ 0.47
LMNAP02545 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LMNAP02545 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.01■□□□□ 0.47
LMNAP02545 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18■□□□□ 0.47
LMNAP02545 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18■□□□□ 0.47
LMNAP02545 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms