Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC105233.2-201ENST00000523697 349 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 AF228730.5-201ENST00000530288 346 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMP1P01033 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.41■□□□□ 0.54
TIMP1P01033 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.41■□□□□ 0.54
TIMP1P01033 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMP1P01033 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TIMP1P01033 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.4■□□□□ 0.54
TIMP1P01033 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
TIMP1P01033 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TIMP1P01033 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 AC098614.1-201ENST00000368528 745 ntBASIC18.4■□□□□ 0.54
TIMP1P01033 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.4■□□□□ 0.54
TIMP1P01033 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 API5-211ENST00000534695 560 ntTSL 5 BASIC18.4■□□□□ 0.54
TIMP1P01033 HILS1-202ENST00000545329 423 ntBASIC18.4■□□□□ 0.54
TIMP1P01033 AC009407.1-201ENST00000568958 598 ntBASIC18.4■□□□□ 0.54
TIMP1P01033 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.4■□□□□ 0.54
TIMP1P01033 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TIMP1P01033 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.4■□□□□ 0.54
TIMP1P01033 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.4■□□□□ 0.54
TIMP1P01033 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TIMP1P01033 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.39■□□□□ 0.54
TIMP1P01033 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.39■□□□□ 0.53
TIMP1P01033 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.39■□□□□ 0.53
TIMP1P01033 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 AC140912.1-201ENST00000577171 1054 ntBASIC18.39■□□□□ 0.53
TIMP1P01033 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.39■□□□□ 0.53
TIMP1P01033 AL132655.2-201ENST00000596276 594 ntBASIC18.39■□□□□ 0.53
TIMP1P01033 AP001350.2-201ENST00000625104 1094 ntBASIC18.39■□□□□ 0.53
TIMP1P01033 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TIMP1P01033 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 TOP3BP1-201ENST00000420768 1380 ntBASIC18.39■□□□□ 0.53
TIMP1P01033 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.39■□□□□ 0.53
TIMP1P01033 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.39■□□□□ 0.53
TIMP1P01033 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TIMP1P01033 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.38■□□□□ 0.53
TIMP1P01033 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
TIMP1P01033 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 GIMAP3P-201ENST00000495150 836 ntBASIC18.38■□□□□ 0.53
TIMP1P01033 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.38■□□□□ 0.53
TIMP1P01033 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.38■□□□□ 0.53
TIMP1P01033 AC008738.7-201ENST00000609744 511 ntBASIC18.38■□□□□ 0.53
TIMP1P01033 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TIMP1P01033 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.38■□□□□ 0.53
TIMP1P01033 AC087499.5-201ENST00000452760 1342 ntBASIC18.38■□□□□ 0.53
TIMP1P01033 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TIMP1P01033 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TIMP1P01033 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms