Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.04■□□□□ 0.48
TRUB2O95900 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
TRUB2O95900 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.04■□□□□ 0.48
TRUB2O95900 RNA5SP419-201ENST00000515908 135 ntBASIC18.04■□□□□ 0.48
TRUB2O95900 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.04■□□□□ 0.48
TRUB2O95900 FAM215A-202ENST00000632077 792 ntBASIC18.04■□□□□ 0.48
TRUB2O95900 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.04■□□□□ 0.48
TRUB2O95900 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRUB2O95900 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 HLA-A-201ENST00000376802 1334 ntBASIC18.03■□□□□ 0.48
TRUB2O95900 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB2O95900 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TRUB2O95900 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.03■□□□□ 0.48
TRUB2O95900 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB2O95900 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.03■□□□□ 0.48
TRUB2O95900 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB2O95900 AP001005.1-201ENST00000571755 1248 ntBASIC18.03■□□□□ 0.48
TRUB2O95900 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TRUB2O95900 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB2O95900 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.03■□□□□ 0.48
TRUB2O95900 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRUB2O95900 EGFEM1P-202ENST00000431685 1563 ntBASIC18.03■□□□□ 0.48
TRUB2O95900 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TRUB2O95900 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRUB2O95900 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.03■□□□□ 0.48
TRUB2O95900 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB2O95900 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
TRUB2O95900 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 RPS2P28-201ENST00000314255 741 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.02■□□□□ 0.48
TRUB2O95900 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB2O95900 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.02■□□□□ 0.48
TRUB2O95900 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.02■□□□□ 0.48
TRUB2O95900 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.02■□□□□ 0.48
TRUB2O95900 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB2O95900 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.02■□□□□ 0.48
TRUB2O95900 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.02■□□□□ 0.48
TRUB2O95900 AL049840.3-201ENST00000602669 611 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 AL353135.1-201ENST00000606729 504 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 AL139424.1-201ENST00000607572 797 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 AC004706.3-202ENST00000621574 984 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 AC008735.5-201ENST00000623544 497 ntBASIC18.02■□□□□ 0.48
TRUB2O95900 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRUB2O95900 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.02■□□□□ 0.48
TRUB2O95900 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TRUB2O95900 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.02■□□□□ 0.47
TRUB2O95900 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
TRUB2O95900 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TRUB2O95900 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRUB2O95900 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
TRUB2O95900 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms