Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BEST1O76090 AC026471.1-201ENST00000564629 3026 ntBASIC18.01■□□□□ 0.47
BEST1O76090 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BEST1O76090 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.01■□□□□ 0.47
BEST1O76090 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BEST1O76090 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
BEST1O76090 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.01■□□□□ 0.47
BEST1O76090 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.01■□□□□ 0.47
BEST1O76090 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.01■□□□□ 0.47
BEST1O76090 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.01■□□□□ 0.47
BEST1O76090 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BEST1O76090 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18■□□□□ 0.47
BEST1O76090 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
BEST1O76090 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18■□□□□ 0.47
BEST1O76090 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18■□□□□ 0.47
BEST1O76090 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18■□□□□ 0.47
BEST1O76090 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18■□□□□ 0.47
BEST1O76090 RNA5SP416-201ENST00000516838 111 ntBASIC18■□□□□ 0.47
BEST1O76090 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18■□□□□ 0.47
BEST1O76090 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18■□□□□ 0.47
BEST1O76090 DUX4L17-201ENST00000557360 1267 ntBASIC18■□□□□ 0.47
BEST1O76090 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18■□□□□ 0.47
BEST1O76090 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18■□□□□ 0.47
BEST1O76090 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
BEST1O76090 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BEST1O76090 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
BEST1O76090 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18■□□□□ 0.47
BEST1O76090 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.99■□□□□ 0.47
BEST1O76090 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 AC023274.1-201ENST00000418278 595 ntBASIC17.99■□□□□ 0.47
BEST1O76090 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.99■□□□□ 0.47
BEST1O76090 AC107918.2-201ENST00000530817 355 ntBASIC17.99■□□□□ 0.47
BEST1O76090 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.99■□□□□ 0.47
BEST1O76090 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.99■□□□□ 0.47
BEST1O76090 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 AC010507.1-201ENST00000633895 436 ntBASIC17.99■□□□□ 0.47
BEST1O76090 AC092865.6-201ENST00000642101 219 ntBASIC17.99■□□□□ 0.47
BEST1O76090 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BEST1O76090 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
BEST1O76090 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
BEST1O76090 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
BEST1O76090 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST1O76090 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms