Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
KDELR3O43731 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.42■□□□□ 0.38
KDELR3O43731 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.42■□□□□ 0.38
KDELR3O43731 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
KDELR3O43731 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KDELR3O43731 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KDELR3O43731 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KDELR3O43731 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 AC092053.1-201ENST00000605787 1936 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.41■□□□□ 0.38
KDELR3O43731 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 CRYGEP-201ENST00000412192 528 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.41■□□□□ 0.38
KDELR3O43731 VN2R19P-201ENST00000442399 1052 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 SLC25A6P2-201ENST00000497974 877 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.41■□□□□ 0.38
KDELR3O43731 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.41■□□□□ 0.38
KDELR3O43731 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 OR7E47P-204ENST00000575924 449 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 MIR4751-201ENST00000578027 74 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 AC010654.1-201ENST00000615722 808 ntBASIC17.41■□□□□ 0.38
KDELR3O43731 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KDELR3O43731 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.41■□□□□ 0.38
KDELR3O43731 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KDELR3O43731 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
KDELR3O43731 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.4■□□□□ 0.38
KDELR3O43731 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KDELR3O43731 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KDELR3O43731 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.4■□□□□ 0.38
KDELR3O43731 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.4■□□□□ 0.38
KDELR3O43731 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KDELR3O43731 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KDELR3O43731 AC002310.6-201ENST00000624451 1377 ntBASIC17.4■□□□□ 0.38
KDELR3O43731 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KDELR3O43731 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
KDELR3O43731 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
KDELR3O43731 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KDELR3O43731 FZD10-202ENST00000539839 3282 ntBASIC17.39■□□□□ 0.38
KDELR3O43731 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KDELR3O43731 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KDELR3O43731 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KDELR3O43731 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.39■□□□□ 0.37
KDELR3O43731 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms