Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.35■□□□□ 0.37
SMAD6O43541 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.35■□□□□ 0.37
SMAD6O43541 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMAD6O43541 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.34■□□□□ 0.37
SMAD6O43541 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.34■□□□□ 0.37
SMAD6O43541 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 AC092865.5-201ENST00000545435 363 ntBASIC17.34■□□□□ 0.37
SMAD6O43541 AC040169.1-201ENST00000565382 521 ntBASIC17.34■□□□□ 0.37
SMAD6O43541 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.34■□□□□ 0.37
SMAD6O43541 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.34■□□□□ 0.37
SMAD6O43541 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
SMAD6O43541 AL513190.1-201ENST00000621254 727 ntBASIC17.34■□□□□ 0.37
SMAD6O43541 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMAD6O43541 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.34■□□□□ 0.37
SMAD6O43541 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD6O43541 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMAD6O43541 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMAD6O43541 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD6O43541 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD6O43541 HCG11-201ENST00000411553 5696 ntBASIC17.33■□□□□ 0.37
SMAD6O43541 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.33■□□□□ 0.37
SMAD6O43541 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD6O43541 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.33■□□□□ 0.37
SMAD6O43541 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.33■□□□□ 0.37
SMAD6O43541 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMAD6O43541 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SMAD6O43541 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SMAD6O43541 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMAD6O43541 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.33■□□□□ 0.36
SMAD6O43541 BX842568.4-201ENST00000421222 227 ntBASIC17.33■□□□□ 0.36
SMAD6O43541 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD6O43541 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 AC096734.2-201ENST00000562054 433 ntBASIC17.33■□□□□ 0.36
SMAD6O43541 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.33■□□□□ 0.36
SMAD6O43541 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.33■□□□□ 0.36
SMAD6O43541 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD6O43541 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD6O43541 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD6O43541 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMAD6O43541 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.33■□□□□ 0.36
SMAD6O43541 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.33■□□□□ 0.36
SMAD6O43541 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMAD6O43541 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.32■□□□□ 0.36
SMAD6O43541 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SMAD6O43541 RHOQP3-201ENST00000437982 621 ntBASIC17.32■□□□□ 0.36
SMAD6O43541 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.32■□□□□ 0.36
SMAD6O43541 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SMAD6O43541 CXCL1P1-201ENST00000502804 216 ntBASIC17.32■□□□□ 0.36
SMAD6O43541 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.32■□□□□ 0.36
SMAD6O43541 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.32■□□□□ 0.36
SMAD6O43541 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.32■□□□□ 0.36
SMAD6O43541 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMAD6O43541 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SMAD6O43541 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
SMAD6O43541 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SMAD6O43541 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMAD6O43541 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD6O43541 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.31■□□□□ 0.36
SMAD6O43541 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD6O43541 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.31■□□□□ 0.36
SMAD6O43541 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMAD6O43541 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms