Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.52■□□□□ 0.4
RIPK2O43353 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.52■□□□□ 0.4
RIPK2O43353 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RIPK2O43353 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.52■□□□□ 0.4
RIPK2O43353 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.52■□□□□ 0.4
RIPK2O43353 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.52■□□□□ 0.4
RIPK2O43353 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.52■□□□□ 0.4
RIPK2O43353 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.52■□□□□ 0.4
RIPK2O43353 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.52■□□□□ 0.4
RIPK2O43353 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RIPK2O43353 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RIPK2O43353 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.52■□□□□ 0.39
RIPK2O43353 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RIPK2O43353 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RIPK2O43353 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
RIPK2O43353 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 FAM8A6P-201ENST00000407496 1135 ntBASIC17.51■□□□□ 0.39
RIPK2O43353 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RIPK2O43353 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.51■□□□□ 0.39
RIPK2O43353 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RIPK2O43353 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 AL391256.1-201ENST00000443260 1855 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RIPK2O43353 AL049757.1-201ENST00000616842 1596 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.5■□□□□ 0.39
RIPK2O43353 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 MIR662-201ENST00000384847 95 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 AC092597.1-201ENST00000487352 616 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 ZNF444P1-201ENST00000559497 298 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 AL441883.1-201ENST00000566170 1045 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.5■□□□□ 0.39
RIPK2O43353 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.5■□□□□ 0.39
RIPK2O43353 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.5■□□□□ 0.39
RIPK2O43353 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RIPK2O43353 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 LINC00554-201ENST00000564841 3011 ntBASIC17.5■□□□□ 0.39
RIPK2O43353 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RIPK2O43353 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
RIPK2O43353 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.5■□□□□ 0.39
RIPK2O43353 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 ALOX12P2-203ENST00000570921 1945 ntBASIC17.49■□□□□ 0.39
RIPK2O43353 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 AC105917.1-201ENST00000506637 2539 ntBASIC17.49■□□□□ 0.39
RIPK2O43353 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.49■□□□□ 0.39
RIPK2O43353 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.49■□□□□ 0.39
RIPK2O43353 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RIPK2O43353 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms