Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC19.65■□□□□ 0.74
ATP2A1O14983 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATP2A1O14983 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
ATP2A1O14983 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.65■□□□□ 0.74
ATP2A1O14983 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATP2A1O14983 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATP2A1O14983 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
ATP2A1O14983 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A1O14983 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A1O14983 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATP2A1O14983 AC012317.2-201ENST00000623305 2251 ntBASIC19.64■□□□□ 0.74
ATP2A1O14983 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.74
ATP2A1O14983 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 AC140658.5-201ENST00000438532 169 ntBASIC19.64■□□□□ 0.73
ATP2A1O14983 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 CYMP-203ENST00000474680 1263 ntBASIC19.64■□□□□ 0.73
ATP2A1O14983 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2A1O14983 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A1O14983 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A1O14983 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 AC004835.2-201ENST00000603762 682 ntBASIC19.64■□□□□ 0.73
ATP2A1O14983 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2A1O14983 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.64■□□□□ 0.73
ATP2A1O14983 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2A1O14983 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.64■□□□□ 0.73
ATP2A1O14983 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.64■□□□□ 0.73
ATP2A1O14983 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATP2A1O14983 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.64■□□□□ 0.73
ATP2A1O14983 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
ATP2A1O14983 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ATP2A1O14983 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
ATP2A1O14983 AL355312.1-201ENST00000407115 2176 ntBASIC19.63■□□□□ 0.73
ATP2A1O14983 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2A1O14983 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 AC002056.1-201ENST00000395613 760 ntBASIC19.63■□□□□ 0.73
ATP2A1O14983 AC004461.1-201ENST00000412461 403 ntBASIC19.63■□□□□ 0.73
ATP2A1O14983 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 AL645939.2-201ENST00000427340 991 ntBASIC19.63■□□□□ 0.73
ATP2A1O14983 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2A1O14983 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.63■□□□□ 0.73
ATP2A1O14983 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.63■□□□□ 0.73
ATP2A1O14983 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.63■□□□□ 0.73
ATP2A1O14983 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.63■□□□□ 0.73
ATP2A1O14983 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
ATP2A1O14983 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 PKD1P1-201ENST00000458669 6805 ntBASIC19.63■□□□□ 0.73
ATP2A1O14983 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATP2A1O14983 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ATP2A1O14983 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ATP2A1O14983 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP2A1O14983 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
ATP2A1O14983 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP2A1O14983 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.62■□□□□ 0.73
ATP2A1O14983 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP2A1O14983 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
ATP2A1O14983 AC022145.2-201ENST00000598203 171 ntBASIC19.62■□□□□ 0.73
ATP2A1O14983 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC19.62■□□□□ 0.73
ATP2A1O14983 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
ATP2A1O14983 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
ATP2A1O14983 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ATP2A1O14983 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.62■□□□□ 0.73
ATP2A1O14983 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms