Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.71■□□□□ 0.1
NPIPA3F8WFD2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 MYCLP1-201ENST00000372451 1075 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 AC005104.2-201ENST00000427818 678 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 AC040169.1-201ENST00000565382 521 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 AC010327.4-202ENST00000591484 748 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 PCDHB18P-201ENST00000524813 2368 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 LINC00896-202ENST00000609602 2128 ntBASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.7■□□□□ 0.1
NPIPA3F8WFD2 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AC023274.1-201ENST00000418278 595 ntBASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 STK25P1-201ENST00000585406 838 ntBASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AC064836.3-201ENST00000607928 673 ntBASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AC097637.2-201ENST00000624096 1997 ntBASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.69■□□□□ 0.1
NPIPA3F8WFD2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPIPA3F8WFD2 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms