Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PTPDC1A2A3K4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
PTPDC1A2A3K4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPDC1A2A3K4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PTPDC1A2A3K4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 RPL13AP23-201ENST00000480739 586 ntBASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LINC02012-201ENST00000608206 1725 ntBASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PTPDC1A2A3K4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 PMPCAP1-201ENST00000508114 1576 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 PMS2P1-201ENST00000431037 1228 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 AC092910.1-201ENST00000482027 1129 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 STK19B-204ENST00000512515 211 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 AC023511.2-201ENST00000618803 211 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 AC073592.5-201ENST00000624854 528 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 AC092053.1-201ENST00000605787 1936 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 OR6D1P-202ENST00000641007 5290 ntBASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PTPDC1A2A3K4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AC079776.2-201ENST00000641154 1609 ntBASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AL135999.2-201ENST00000622438 1686 ntBASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AC003669.1-201ENST00000334569 611 ntBASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AC012640.2-201ENST00000561606 901 ntBASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 AC106730.1-201ENST00000566722 1090 ntBASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.24■□□□□ 0.83
PTPDC1A2A3K4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms