Protein–RNA interactions for Protein: Q9Y5H5

PCDHA9, Protocadherin alpha-9, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9Q9Y5H5 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 AC126177.7-201ENST00000547904 679 ntBASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHA9Q9Y5H5 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PCDHA9Q9Y5H5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA9Q9Y5H5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PCDHA9Q9Y5H5 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA9Q9Y5H5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA9Q9Y5H5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA9Q9Y5H5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.24■■□□□ 1.31
PCDHA9Q9Y5H5 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PCDHA9Q9Y5H5 AC010501.1-201ENST00000606270 1962 ntBASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PCDHA9Q9Y5H5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.22■■□□□ 1.31
PCDHA9Q9Y5H5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.22■■□□□ 1.31
PCDHA9Q9Y5H5 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
PCDHA9Q9Y5H5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA9Q9Y5H5 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA9Q9Y5H5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA9Q9Y5H5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
PCDHA9Q9Y5H5 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHA9Q9Y5H5 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA9Q9Y5H5 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA9Q9Y5H5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA9Q9Y5H5 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC23.18■■□□□ 1.3
PCDHA9Q9Y5H5 MIR4449-201ENST00000578365 66 ntBASIC23.18■■□□□ 1.3
PCDHA9Q9Y5H5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA9Q9Y5H5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA9Q9Y5H5 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 AL359504.2-201ENST00000605506 1601 ntBASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC23.17■■□□□ 1.3
PCDHA9Q9Y5H5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHA9Q9Y5H5 SRP68-213ENST00000629930 165 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHA9Q9Y5H5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA9Q9Y5H5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA9Q9Y5H5 AC142381.3-201ENST00000568208 1670 ntBASIC23.16■■□□□ 1.3
PCDHA9Q9Y5H5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHA9Q9Y5H5 AC060814.1-201ENST00000554326 538 ntBASIC23.14■■□□□ 1.29
PCDHA9Q9Y5H5 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA9Q9Y5H5 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.14■■□□□ 1.29
PCDHA9Q9Y5H5 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PCDHA9Q9Y5H5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDHA9Q9Y5H5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.12■■□□□ 1.29
PCDHA9Q9Y5H5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA9Q9Y5H5 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDHA9Q9Y5H5 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA9Q9Y5H5 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PCDHA9Q9Y5H5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDHA9Q9Y5H5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms