Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 ABCB10P3-201ENST00000561950 2166 ntBASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TFCP2L1Q9NZI6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC31.26■■■□□ 2.6
TFCP2L1Q9NZI6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
TFCP2L1Q9NZI6 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC31.25■■■□□ 2.59
TFCP2L1Q9NZI6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TFCP2L1Q9NZI6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TFCP2L1Q9NZI6 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 KRT18P24-201ENST00000344739 1156 ntBASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TFCP2L1Q9NZI6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.23■■■□□ 2.59
TFCP2L1Q9NZI6 AL136116.3-201ENST00000402907 1138 ntBASIC31.23■■■□□ 2.59
TFCP2L1Q9NZI6 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.23■■■□□ 2.59
TFCP2L1Q9NZI6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
TFCP2L1Q9NZI6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 AC137630.3-201ENST00000607245 391 ntBASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TFCP2L1Q9NZI6 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
TFCP2L1Q9NZI6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
TFCP2L1Q9NZI6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
TFCP2L1Q9NZI6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TFCP2L1Q9NZI6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
TFCP2L1Q9NZI6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC31.2■■■□□ 2.59
TFCP2L1Q9NZI6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
TFCP2L1Q9NZI6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
TFCP2L1Q9NZI6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.58
TFCP2L1Q9NZI6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.19■■■□□ 2.58
TFCP2L1Q9NZI6 AC021242.3-201ENST00000607598 1377 ntBASIC31.19■■■□□ 2.58
TFCP2L1Q9NZI6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.19■■■□□ 2.58
TFCP2L1Q9NZI6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.18■■■□□ 2.58
TFCP2L1Q9NZI6 AC005837.3-201ENST00000612163 286 ntBASIC31.18■■■□□ 2.58
TFCP2L1Q9NZI6 AC110285.6-201ENST00000617652 491 ntBASIC31.18■■■□□ 2.58
TFCP2L1Q9NZI6 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TFCP2L1Q9NZI6 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TFCP2L1Q9NZI6 WHAMMP3-201ENST00000611636 1609 ntBASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.17■■■□□ 2.58
TFCP2L1Q9NZI6 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.16■■■□□ 2.58
TFCP2L1Q9NZI6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.16■■■□□ 2.58
TFCP2L1Q9NZI6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
TFCP2L1Q9NZI6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.15■■■□□ 2.58
TFCP2L1Q9NZI6 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.15■■■□□ 2.58
TFCP2L1Q9NZI6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.15■■■□□ 2.58
TFCP2L1Q9NZI6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TFCP2L1Q9NZI6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC31.15■■■□□ 2.58
TFCP2L1Q9NZI6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 AC092028.1-203ENST00000608262 953 ntBASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
TFCP2L1Q9NZI6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.12■■■□□ 2.57
TFCP2L1Q9NZI6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TFCP2L1Q9NZI6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.11■■■□□ 2.57
TFCP2L1Q9NZI6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
TFCP2L1Q9NZI6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TFCP2L1Q9NZI6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.1■■■□□ 2.57
TFCP2L1Q9NZI6 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
TFCP2L1Q9NZI6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TFCP2L1Q9NZI6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.1■■■□□ 2.57
TFCP2L1Q9NZI6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.09■■■□□ 2.57
TFCP2L1Q9NZI6 AL139393.2-201ENST00000608721 2025 ntBASIC31.09■■■□□ 2.57
TFCP2L1Q9NZI6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.09■■■□□ 2.57
TFCP2L1Q9NZI6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 AC096631.2-201ENST00000436136 790 ntBASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 AC092666.2-201ENST00000613287 246 ntBASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TFCP2L1Q9NZI6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
TFCP2L1Q9NZI6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
TFCP2L1Q9NZI6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.07■■■□□ 2.56
TFCP2L1Q9NZI6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.07■■■□□ 2.56
TFCP2L1Q9NZI6 AC120024.1-201ENST00000562672 995 ntBASIC31.07■■■□□ 2.56
TFCP2L1Q9NZI6 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TFCP2L1Q9NZI6 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
TFCP2L1Q9NZI6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms