Protein–RNA interactions for Protein: Q9H6Z4

RANBP3, Ran-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 567 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3Q9H6Z4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RANBP3Q9H6Z4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.81■□□□□ 0.92
RANBP3Q9H6Z4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RANBP3Q9H6Z4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RANBP3Q9H6Z4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RANBP3Q9H6Z4 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 MIR639-201ENST00000384974 98 ntBASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RANBP3Q9H6Z4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 AL139125.2-201ENST00000623134 1869 ntBASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 MIR3648-2-201ENST00000581792 180 ntBASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 MIR3648-1-201ENST00000615959 180 ntBASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.78■□□□□ 0.92
RANBP3Q9H6Z4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RANBP3Q9H6Z4 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RANBP3Q9H6Z4 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.77■□□□□ 0.92
RANBP3Q9H6Z4 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RANBP3Q9H6Z4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RANBP3Q9H6Z4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.75■□□□□ 0.91
RANBP3Q9H6Z4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RANBP3Q9H6Z4 AC127502.1-201ENST00000399971 1502 ntBASIC20.74■□□□□ 0.91
RANBP3Q9H6Z4 MIR4449-201ENST00000578365 66 ntBASIC20.74■□□□□ 0.91
RANBP3Q9H6Z4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RANBP3Q9H6Z4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.73■□□□□ 0.91
RANBP3Q9H6Z4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 AC100797.4-201ENST00000631653 1827 ntBASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 AC016575.1-201ENST00000607026 382 ntBASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 CR559946.2-201ENST00000623684 991 ntBASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RANBP3Q9H6Z4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 AP002414.2-202ENST00000590929 1450 ntBASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RANBP3Q9H6Z4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RANBP3Q9H6Z4 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RANBP3Q9H6Z4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L13-201ENST00000554103 1267 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L15-201ENST00000611059 1267 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L23-201ENST00000615195 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L24-201ENST00000617576 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L22-201ENST00000618238 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L20-201ENST00000619712 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L21-201ENST00000622058 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L10-201ENST00000622460 1267 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 DUX4L25-201ENST00000624915 1269 ntBASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.69■□□□□ 0.9
RANBP3Q9H6Z4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.68■□□□□ 0.9
RANBP3Q9H6Z4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
RANBP3Q9H6Z4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RANBP3Q9H6Z4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RANBP3Q9H6Z4 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RANBP3Q9H6Z4 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms