Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
CHMP4BQ9H444 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
CHMP4BQ9H444 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CHMP4BQ9H444 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.55■■■□□ 2.48
CHMP4BQ9H444 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.55■■■□□ 2.48
CHMP4BQ9H444 ERN1-208ENST00000606895 2068 ntBASIC30.54■■■□□ 2.48
CHMP4BQ9H444 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.54■■■□□ 2.48
CHMP4BQ9H444 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CHMP4BQ9H444 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CHMP4BQ9H444 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC30.53■■■□□ 2.48
CHMP4BQ9H444 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC30.53■■■□□ 2.48
CHMP4BQ9H444 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CHMP4BQ9H444 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
CHMP4BQ9H444 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC30.51■■■□□ 2.47
CHMP4BQ9H444 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC30.51■■■□□ 2.47
CHMP4BQ9H444 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC30.51■■■□□ 2.47
CHMP4BQ9H444 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
CHMP4BQ9H444 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.49■■■□□ 2.47
CHMP4BQ9H444 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
CHMP4BQ9H444 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHMP4BQ9H444 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC30.48■■■□□ 2.47
CHMP4BQ9H444 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHMP4BQ9H444 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC30.48■■■□□ 2.47
CHMP4BQ9H444 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CHMP4BQ9H444 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHMP4BQ9H444 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHMP4BQ9H444 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC30.47■■■□□ 2.47
CHMP4BQ9H444 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC30.47■■■□□ 2.47
CHMP4BQ9H444 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.47■■■□□ 2.47
CHMP4BQ9H444 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.46■■■□□ 2.47
CHMP4BQ9H444 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC30.46■■■□□ 2.47
CHMP4BQ9H444 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC30.45■■■□□ 2.47
CHMP4BQ9H444 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
CHMP4BQ9H444 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.45■■■□□ 2.47
CHMP4BQ9H444 GPX1-201ENST00000419349 1106 ntBASIC30.45■■■□□ 2.47
CHMP4BQ9H444 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.45■■■□□ 2.46
CHMP4BQ9H444 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CHMP4BQ9H444 RP9P-202ENST00000450133 1212 ntBASIC30.44■■■□□ 2.46
CHMP4BQ9H444 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.44■■■□□ 2.46
CHMP4BQ9H444 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
CHMP4BQ9H444 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC30.43■■■□□ 2.46
CHMP4BQ9H444 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30.43■■■□□ 2.46
CHMP4BQ9H444 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.43■■■□□ 2.46
CHMP4BQ9H444 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHMP4BQ9H444 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHMP4BQ9H444 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC30.42■■■□□ 2.46
CHMP4BQ9H444 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC30.42■■■□□ 2.46
CHMP4BQ9H444 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHMP4BQ9H444 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
CHMP4BQ9H444 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHMP4BQ9H444 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CHMP4BQ9H444 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHMP4BQ9H444 AC096887.2-201ENST00000623443 1957 ntBASIC30.4■■■□□ 2.46
CHMP4BQ9H444 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHMP4BQ9H444 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.39■■■□□ 2.46
CHMP4BQ9H444 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHMP4BQ9H444 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 AC007029.1-201ENST00000604183 313 ntBASIC30.38■■■□□ 2.45
CHMP4BQ9H444 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHMP4BQ9H444 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
CHMP4BQ9H444 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.37■■■□□ 2.45
CHMP4BQ9H444 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP4BQ9H444 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP4BQ9H444 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CHMP4BQ9H444 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP4BQ9H444 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHMP4BQ9H444 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP4BQ9H444 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP4BQ9H444 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP4BQ9H444 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP4BQ9H444 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
CHMP4BQ9H444 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP4BQ9H444 AC093536.1-201ENST00000569153 554 ntBASIC30.34■■■□□ 2.45
CHMP4BQ9H444 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.34■■■□□ 2.45
CHMP4BQ9H444 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CHMP4BQ9H444 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP4BQ9H444 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.33■■■□□ 2.45
CHMP4BQ9H444 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC30.33■■■□□ 2.45
CHMP4BQ9H444 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC30.33■■■□□ 2.45
CHMP4BQ9H444 AC020928.2-201ENST00000588717 2197 ntBASIC30.32■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms