Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
PCDH11YQ9BZA8 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 AL449106.1-201ENST00000608517 1980 ntBASIC31.96■■■□□ 2.71
PCDH11YQ9BZA8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
PCDH11YQ9BZA8 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
PCDH11YQ9BZA8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.7
PCDH11YQ9BZA8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.95■■■□□ 2.7
PCDH11YQ9BZA8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.95■■■□□ 2.7
PCDH11YQ9BZA8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.95■■■□□ 2.7
PCDH11YQ9BZA8 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11YQ9BZA8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11YQ9BZA8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11YQ9BZA8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PCDH11YQ9BZA8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
PCDH11YQ9BZA8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC31.93■■■□□ 2.7
PCDH11YQ9BZA8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.93■■■□□ 2.7
PCDH11YQ9BZA8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11YQ9BZA8 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11YQ9BZA8 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.92■■■□□ 2.7
PCDH11YQ9BZA8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.92■■■□□ 2.7
PCDH11YQ9BZA8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
PCDH11YQ9BZA8 KRT18P10-201ENST00000388836 1287 ntBASIC31.91■■■□□ 2.7
PCDH11YQ9BZA8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.91■■■□□ 2.7
PCDH11YQ9BZA8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 AC022616.5-201ENST00000518796 181 ntBASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PCDH11YQ9BZA8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.89■■■□□ 2.7
PCDH11YQ9BZA8 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDH11YQ9BZA8 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
PCDH11YQ9BZA8 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11YQ9BZA8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11YQ9BZA8 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PCDH11YQ9BZA8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC31.86■■■□□ 2.69
PCDH11YQ9BZA8 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.85■■■□□ 2.69
PCDH11YQ9BZA8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.85■■■□□ 2.69
PCDH11YQ9BZA8 DRD5P2-201ENST00000421395 2012 ntBASIC31.85■■■□□ 2.69
PCDH11YQ9BZA8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 KRT125P-201ENST00000546827 989 ntBASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PCDH11YQ9BZA8 BX664725.1-201ENST00000438252 379 ntBASIC31.83■■■□□ 2.69
PCDH11YQ9BZA8 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PCDH11YQ9BZA8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.82■■■□□ 2.69
PCDH11YQ9BZA8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.82■■■□□ 2.69
PCDH11YQ9BZA8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.82■■■□□ 2.68
PCDH11YQ9BZA8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCDH11YQ9BZA8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
PCDH11YQ9BZA8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC31.82■■■□□ 2.68
PCDH11YQ9BZA8 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.82■■■□□ 2.68
PCDH11YQ9BZA8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 MIR4787-201ENST00000607364 84 ntBASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PCDH11YQ9BZA8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
PCDH11YQ9BZA8 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PCDH11YQ9BZA8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC31.8■■■□□ 2.68
PCDH11YQ9BZA8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC31.79■■■□□ 2.68
PCDH11YQ9BZA8 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCDH11YQ9BZA8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.79■■■□□ 2.68
PCDH11YQ9BZA8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.79■■■□□ 2.68
PCDH11YQ9BZA8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
PCDH11YQ9BZA8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCDH11YQ9BZA8 LINC01003-201ENST00000564834 1764 ntBASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 KRT18P24-201ENST00000344739 1156 ntBASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
PCDH11YQ9BZA8 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.76■■■□□ 2.68
PCDH11YQ9BZA8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCDH11YQ9BZA8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms