Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 AC021231.2-201ENST00000594613 730 ntBASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
KRTAP3-1Q9BYR8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
KRTAP3-1Q9BYR8 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
KRTAP3-1Q9BYR8 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
KRTAP3-1Q9BYR8 AC133561.1-201ENST00000568600 2415 ntBASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 AL162393.1-201ENST00000437852 946 ntBASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC12.23□□□□□ -0.45
KRTAP3-1Q9BYR8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 LINC01124-201ENST00000409786 2117 ntBASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC12.22□□□□□ -0.45
KRTAP3-1Q9BYR8 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 BOD1-206ENST00000480951 814 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 AC044849.2-201ENST00000606596 710 ntBASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
KRTAP3-1Q9BYR8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
KRTAP3-1Q9BYR8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
KRTAP3-1Q9BYR8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
KRTAP3-1Q9BYR8 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms