Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VRK1Q99986 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
VRK1Q99986 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.11■□□□□ 0.97
VRK1Q99986 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK1Q99986 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.11■□□□□ 0.97
VRK1Q99986 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
VRK1Q99986 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
VRK1Q99986 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VRK1Q99986 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
VRK1Q99986 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.09■□□□□ 0.97
VRK1Q99986 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
VRK1Q99986 KRT18P60-201ENST00000312876 1297 ntBASIC21.09■□□□□ 0.97
VRK1Q99986 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.09■□□□□ 0.97
VRK1Q99986 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.09■□□□□ 0.97
VRK1Q99986 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.08■□□□□ 0.97
VRK1Q99986 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
VRK1Q99986 AC133552.2-201ENST00000619106 1032 ntBASIC21.08■□□□□ 0.97
VRK1Q99986 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.08■□□□□ 0.96
VRK1Q99986 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK1Q99986 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC21.07■□□□□ 0.96
VRK1Q99986 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK1Q99986 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK1Q99986 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.07■□□□□ 0.96
VRK1Q99986 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
VRK1Q99986 AC091060.1-201ENST00000623524 1766 ntBASIC21.07■□□□□ 0.96
VRK1Q99986 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
VRK1Q99986 AC020928.2-201ENST00000588717 2197 ntBASIC21.06■□□□□ 0.96
VRK1Q99986 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.06■□□□□ 0.96
VRK1Q99986 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.05■□□□□ 0.96
VRK1Q99986 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK1Q99986 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.05■□□□□ 0.96
VRK1Q99986 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRK1Q99986 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
VRK1Q99986 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
VRK1Q99986 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
VRK1Q99986 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK1Q99986 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
VRK1Q99986 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
VRK1Q99986 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.04■□□□□ 0.96
VRK1Q99986 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
VRK1Q99986 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
VRK1Q99986 AC009831.1-201ENST00000580420 1582 ntBASIC21.03■□□□□ 0.96
VRK1Q99986 TSPY13P-201ENST00000338964 914 ntBASIC21.03■□□□□ 0.96
VRK1Q99986 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.03■□□□□ 0.96
VRK1Q99986 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
VRK1Q99986 AC093323.1-202ENST00000635031 2045 ntBASIC21.03■□□□□ 0.96
VRK1Q99986 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.02■□□□□ 0.96
VRK1Q99986 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK1Q99986 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.02■□□□□ 0.96
VRK1Q99986 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK1Q99986 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
VRK1Q99986 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
VRK1Q99986 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
VRK1Q99986 AC004987.1-201ENST00000428627 508 ntBASIC21.02■□□□□ 0.96
VRK1Q99986 ATP5G2P3-201ENST00000429083 425 ntBASIC21.02■□□□□ 0.96
VRK1Q99986 RP9P-202ENST00000450133 1212 ntBASIC21.02■□□□□ 0.96
VRK1Q99986 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
VRK1Q99986 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
VRK1Q99986 AC025884.2-201ENST00000553429 711 ntBASIC21.02■□□□□ 0.96
VRK1Q99986 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
VRK1Q99986 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 WHAMMP3-201ENST00000611636 1609 ntBASIC21.01■□□□□ 0.95
VRK1Q99986 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VRK1Q99986 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.01■□□□□ 0.95
VRK1Q99986 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
VRK1Q99986 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 AL592293.1-201ENST00000502889 1188 ntBASIC21.01■□□□□ 0.95
VRK1Q99986 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VRK1Q99986 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
VRK1Q99986 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
VRK1Q99986 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
VRK1Q99986 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21■□□□□ 0.95
VRK1Q99986 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
VRK1Q99986 AC093536.1-201ENST00000569153 554 ntBASIC21■□□□□ 0.95
VRK1Q99986 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
VRK1Q99986 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21■□□□□ 0.95
VRK1Q99986 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK1Q99986 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.99■□□□□ 0.95
VRK1Q99986 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.99■□□□□ 0.95
VRK1Q99986 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.99■□□□□ 0.95
VRK1Q99986 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.99■□□□□ 0.95
VRK1Q99986 MIR3960-201ENST00000583311 91 ntBASIC20.99■□□□□ 0.95
VRK1Q99986 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.99■□□□□ 0.95
VRK1Q99986 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
VRK1Q99986 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VRK1Q99986 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
VRK1Q99986 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
VRK1Q99986 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms