Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.76■■□□□ 1.23
COL21A1Q96P44 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
COL21A1Q96P44 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
COL21A1Q96P44 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
COL21A1Q96P44 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.75■■□□□ 1.23
COL21A1Q96P44 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.75■■□□□ 1.23
COL21A1Q96P44 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COL21A1Q96P44 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL21A1Q96P44 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
COL21A1Q96P44 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.74■■□□□ 1.23
COL21A1Q96P44 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.74■■□□□ 1.23
COL21A1Q96P44 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
COL21A1Q96P44 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
COL21A1Q96P44 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL21A1Q96P44 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
COL21A1Q96P44 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL21A1Q96P44 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL21A1Q96P44 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
COL21A1Q96P44 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COL21A1Q96P44 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL21A1Q96P44 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.72■■□□□ 1.23
COL21A1Q96P44 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
COL21A1Q96P44 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
COL21A1Q96P44 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL21A1Q96P44 AC092296.2-201ENST00000589470 999 ntBASIC22.71■■□□□ 1.23
COL21A1Q96P44 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.71■■□□□ 1.23
COL21A1Q96P44 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.71■■□□□ 1.23
COL21A1Q96P44 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC22.71■■□□□ 1.23
COL21A1Q96P44 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COL21A1Q96P44 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COL21A1Q96P44 HSD17B1P1-201ENST00000590052 955 ntBASIC22.7■■□□□ 1.22
COL21A1Q96P44 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
COL21A1Q96P44 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
COL21A1Q96P44 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.7■■□□□ 1.22
COL21A1Q96P44 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
COL21A1Q96P44 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
COL21A1Q96P44 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.69■■□□□ 1.22
COL21A1Q96P44 AL157400.5-201ENST00000507624 621 ntBASIC22.69■■□□□ 1.22
COL21A1Q96P44 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
COL21A1Q96P44 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL21A1Q96P44 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
COL21A1Q96P44 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.68■■□□□ 1.22
COL21A1Q96P44 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL21A1Q96P44 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COL21A1Q96P44 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COL21A1Q96P44 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.68■■□□□ 1.22
COL21A1Q96P44 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
COL21A1Q96P44 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
COL21A1Q96P44 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
COL21A1Q96P44 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.67■■□□□ 1.22
COL21A1Q96P44 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.66■■□□□ 1.22
COL21A1Q96P44 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.66■■□□□ 1.22
COL21A1Q96P44 RNF126P1-201ENST00000567452 1320 ntBASIC22.66■■□□□ 1.22
COL21A1Q96P44 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
COL21A1Q96P44 ECEL1P2-201ENST00000461596 1295 ntBASIC22.66■■□□□ 1.22
COL21A1Q96P44 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.66■■□□□ 1.22
COL21A1Q96P44 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL21A1Q96P44 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL21A1Q96P44 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
COL21A1Q96P44 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL21A1Q96P44 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL21A1Q96P44 AL359504.2-201ENST00000605506 1601 ntBASIC22.64■■□□□ 1.22
COL21A1Q96P44 ERN1-208ENST00000606895 2068 ntBASIC22.64■■□□□ 1.22
COL21A1Q96P44 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.64■■□□□ 1.22
COL21A1Q96P44 AC093323.1-202ENST00000635031 2045 ntBASIC22.64■■□□□ 1.22
COL21A1Q96P44 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL21A1Q96P44 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL21A1Q96P44 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
COL21A1Q96P44 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.64■■□□□ 1.21
COL21A1Q96P44 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.21
COL21A1Q96P44 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.64■■□□□ 1.21
COL21A1Q96P44 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL21A1Q96P44 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.63■■□□□ 1.21
COL21A1Q96P44 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL21A1Q96P44 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL21A1Q96P44 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.63■■□□□ 1.21
COL21A1Q96P44 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC22.63■■□□□ 1.21
COL21A1Q96P44 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL21A1Q96P44 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
COL21A1Q96P44 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 SNAI3-AS1-204ENST00000567997 2048 ntBASIC22.62■■□□□ 1.21
COL21A1Q96P44 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL21A1Q96P44 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms