Protein–RNA interactions for Protein: Q92925

SMARCD2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, humanhuman

Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2Q92925 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCD2Q92925 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCD2Q92925 KRT18P10-201ENST00000388836 1287 ntBASIC25.19■■□□□ 1.62
SMARCD2Q92925 TK2-216ENST00000564917 1156 ntTSL 3 BASIC25.19■■□□□ 1.62
SMARCD2Q92925 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMARCD2Q92925 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC25.19■■□□□ 1.62
SMARCD2Q92925 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMARCD2Q92925 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SMARCD2Q92925 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCD2Q92925 AC239859.2-201ENST00000444165 318 ntBASIC25.17■■□□□ 1.62
SMARCD2Q92925 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCD2Q92925 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCD2Q92925 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SMARCD2Q92925 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMARCD2Q92925 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.16■■□□□ 1.62
SMARCD2Q92925 AL356441.2-201ENST00000443009 864 ntBASIC25.16■■□□□ 1.62
SMARCD2Q92925 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC25.16■■□□□ 1.62
SMARCD2Q92925 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC25.16■■□□□ 1.62
SMARCD2Q92925 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCD2Q92925 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.15■■□□□ 1.62
SMARCD2Q92925 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCD2Q92925 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCD2Q92925 Z92544.1-202ENST00000571933 1220 ntBASIC25.15■■□□□ 1.62
SMARCD2Q92925 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCD2Q92925 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMARCD2Q92925 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
SMARCD2Q92925 LINC01003-201ENST00000564834 1764 ntBASIC25.15■■□□□ 1.62
SMARCD2Q92925 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC25.14■■□□□ 1.62
SMARCD2Q92925 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMARCD2Q92925 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMARCD2Q92925 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SMARCD2Q92925 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCD2Q92925 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMARCD2Q92925 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.13■■□□□ 1.61
SMARCD2Q92925 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC25.13■■□□□ 1.61
SMARCD2Q92925 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCD2Q92925 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
SMARCD2Q92925 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCD2Q92925 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.12■■□□□ 1.61
SMARCD2Q92925 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SMARCD2Q92925 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.11■■□□□ 1.61
SMARCD2Q92925 AC022616.5-201ENST00000518796 181 ntBASIC25.11■■□□□ 1.61
SMARCD2Q92925 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC25.11■■□□□ 1.61
SMARCD2Q92925 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
SMARCD2Q92925 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
SMARCD2Q92925 AC139426.1-201ENST00000568218 2529 ntBASIC25.1■■□□□ 1.61
SMARCD2Q92925 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCD2Q92925 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCD2Q92925 MTURN-203ENST00000409688 843 ntTSL 2 BASIC25.1■■□□□ 1.61
SMARCD2Q92925 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCD2Q92925 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.1■■□□□ 1.61
SMARCD2Q92925 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC25.1■■□□□ 1.61
SMARCD2Q92925 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SMARCD2Q92925 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC25.09■■□□□ 1.61
SMARCD2Q92925 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC25.09■■□□□ 1.61
SMARCD2Q92925 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.09■■□□□ 1.61
SMARCD2Q92925 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SMARCD2Q92925 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCD2Q92925 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCD2Q92925 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
SMARCD2Q92925 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.61
SMARCD2Q92925 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
SMARCD2Q92925 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.08■■□□□ 1.6
SMARCD2Q92925 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC25.08■■□□□ 1.6
SMARCD2Q92925 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC25.08■■□□□ 1.6
SMARCD2Q92925 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCD2Q92925 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SMARCD2Q92925 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
SMARCD2Q92925 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
SMARCD2Q92925 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCD2Q92925 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC25.06■■□□□ 1.6
SMARCD2Q92925 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC25.06■■□□□ 1.6
SMARCD2Q92925 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
SMARCD2Q92925 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCD2Q92925 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.05■■□□□ 1.6
SMARCD2Q92925 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCD2Q92925 BX255925.1-201ENST00000566954 1854 ntBASIC25.05■■□□□ 1.6
SMARCD2Q92925 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.05■■□□□ 1.6
SMARCD2Q92925 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCD2Q92925 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SMARCD2Q92925 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SMARCD2Q92925 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC25.04■■□□□ 1.6
SMARCD2Q92925 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.04■■□□□ 1.6
SMARCD2Q92925 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SMARCD2Q92925 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SMARCD2Q92925 CREM-229ENST00000474362 1030 ntTSL 2 BASIC25.03■■□□□ 1.6
SMARCD2Q92925 KRT125P-201ENST00000546827 989 ntBASIC25.03■■□□□ 1.6
SMARCD2Q92925 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms