Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RAPGEF4Q8WZA2 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
RAPGEF4Q8WZA2 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC32.19■■■□□ 2.74
RAPGEF4Q8WZA2 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF4Q8WZA2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RAPGEF4Q8WZA2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.19■■■□□ 2.74
RAPGEF4Q8WZA2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
RAPGEF4Q8WZA2 DRD5P2-201ENST00000421395 2012 ntBASIC32.18■■■□□ 2.74
RAPGEF4Q8WZA2 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
RAPGEF4Q8WZA2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC32.17■■■□□ 2.74
RAPGEF4Q8WZA2 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
RAPGEF4Q8WZA2 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC32.15■■■□□ 2.74
RAPGEF4Q8WZA2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC32.15■■■□□ 2.74
RAPGEF4Q8WZA2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC32.15■■■□□ 2.74
RAPGEF4Q8WZA2 Z92544.1-202ENST00000571933 1220 ntBASIC32.15■■■□□ 2.74
RAPGEF4Q8WZA2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
RAPGEF4Q8WZA2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RAPGEF4Q8WZA2 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
RAPGEF4Q8WZA2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC32.14■■■□□ 2.74
RAPGEF4Q8WZA2 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
RAPGEF4Q8WZA2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF4Q8WZA2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF4Q8WZA2 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
RAPGEF4Q8WZA2 KRT18P10-201ENST00000388836 1287 ntBASIC32.12■■■□□ 2.73
RAPGEF4Q8WZA2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
RAPGEF4Q8WZA2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
RAPGEF4Q8WZA2 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF4Q8WZA2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
RAPGEF4Q8WZA2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
RAPGEF4Q8WZA2 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC32.1■■■□□ 2.73
RAPGEF4Q8WZA2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
RAPGEF4Q8WZA2 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC32.09■■■□□ 2.73
RAPGEF4Q8WZA2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC32.08■■■□□ 2.73
RAPGEF4Q8WZA2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
RAPGEF4Q8WZA2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC32.08■■■□□ 2.73
RAPGEF4Q8WZA2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC32.08■■■□□ 2.73
RAPGEF4Q8WZA2 LINC01003-201ENST00000564834 1764 ntBASIC32.08■■■□□ 2.73
RAPGEF4Q8WZA2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.07■■■□□ 2.72
RAPGEF4Q8WZA2 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC32.07■■■□□ 2.72
RAPGEF4Q8WZA2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 AC022616.5-201ENST00000518796 181 ntBASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.06■■■□□ 2.72
RAPGEF4Q8WZA2 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 AC139426.1-201ENST00000568218 2529 ntBASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 AC019069.1-201ENST00000610008 1333 ntBASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC32.05■■■□□ 2.72
RAPGEF4Q8WZA2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC32.04■■■□□ 2.72
RAPGEF4Q8WZA2 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
RAPGEF4Q8WZA2 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF4Q8WZA2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF4Q8WZA2 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC32.03■■■□□ 2.72
RAPGEF4Q8WZA2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RAPGEF4Q8WZA2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
RAPGEF4Q8WZA2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.01■■■□□ 2.72
RAPGEF4Q8WZA2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
RAPGEF4Q8WZA2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC32.01■■■□□ 2.71
RAPGEF4Q8WZA2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC32.01■■■□□ 2.71
RAPGEF4Q8WZA2 KRT125P-201ENST00000546827 989 ntBASIC32.01■■■□□ 2.71
RAPGEF4Q8WZA2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
RAPGEF4Q8WZA2 BX664725.1-201ENST00000438252 379 ntBASIC31.99■■■□□ 2.71
RAPGEF4Q8WZA2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC31.99■■■□□ 2.71
RAPGEF4Q8WZA2 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
RAPGEF4Q8WZA2 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.99■■■□□ 2.71
RAPGEF4Q8WZA2 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF4Q8WZA2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.98■■■□□ 2.71
RAPGEF4Q8WZA2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF4Q8WZA2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
RAPGEF4Q8WZA2 GRAMD4P7-201ENST00000578182 1232 ntBASIC31.98■■■□□ 2.71
RAPGEF4Q8WZA2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms