Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RPS4Y2Q8TD47 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 AC148477.6-201ENST00000623746 465 ntBASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.16■□□□□ 0.98
RPS4Y2Q8TD47 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.15■□□□□ 0.98
RPS4Y2Q8TD47 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
RPS4Y2Q8TD47 ABHD17AP4-201ENST00000411545 909 ntBASIC21.14■□□□□ 0.97
RPS4Y2Q8TD47 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
RPS4Y2Q8TD47 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC21.14■□□□□ 0.97
RPS4Y2Q8TD47 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.14■□□□□ 0.97
RPS4Y2Q8TD47 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPS4Y2Q8TD47 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPS4Y2Q8TD47 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPS4Y2Q8TD47 MIR219A2-201ENST00000608502 1504 ntBASIC21.13■□□□□ 0.97
RPS4Y2Q8TD47 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
RPS4Y2Q8TD47 AC008813.1-201ENST00000536597 885 ntBASIC21.12■□□□□ 0.97
RPS4Y2Q8TD47 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS4Y2Q8TD47 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS4Y2Q8TD47 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.12■□□□□ 0.97
RPS4Y2Q8TD47 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RPS4Y2Q8TD47 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RPS4Y2Q8TD47 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 LINC01971-201ENST00000617888 1048 ntBASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RPS4Y2Q8TD47 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RPS4Y2Q8TD47 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L13-201ENST00000554103 1267 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L15-201ENST00000611059 1267 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L23-201ENST00000615195 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L24-201ENST00000617576 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L22-201ENST00000618238 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L20-201ENST00000619712 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L21-201ENST00000622058 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L10-201ENST00000622460 1267 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 DUX4L25-201ENST00000624915 1269 ntBASIC21.08■□□□□ 0.97
RPS4Y2Q8TD47 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPS4Y2Q8TD47 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RPS4Y2Q8TD47 AL359504.2-201ENST00000605506 1601 ntBASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RPS4Y2Q8TD47 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RPS4Y2Q8TD47 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPS4Y2Q8TD47 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms