Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
DNAAF1Q8NEP3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.08■□□□□ 0.97
DNAAF1Q8NEP3 AC142381.3-201ENST00000568208 1670 ntBASIC21.08■□□□□ 0.96
DNAAF1Q8NEP3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
DNAAF1Q8NEP3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
DNAAF1Q8NEP3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 AC148477.6-201ENST00000623746 465 ntBASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.07■□□□□ 0.96
DNAAF1Q8NEP3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.06■□□□□ 0.96
DNAAF1Q8NEP3 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 AC022211.4-201ENST00000625094 2161 ntBASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 AC138932.3-201ENST00000567634 1902 ntBASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
DNAAF1Q8NEP3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
DNAAF1Q8NEP3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 ZNRF2P2-203ENST00000454624 420 ntBASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
DNAAF1Q8NEP3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 MIR219A2-201ENST00000608502 1504 ntBASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DNAAF1Q8NEP3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
DNAAF1Q8NEP3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.02■□□□□ 0.95
DNAAF1Q8NEP3 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF1Q8NEP3 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF1Q8NEP3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF1Q8NEP3 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF1Q8NEP3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF1Q8NEP3 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21■□□□□ 0.95
DNAAF1Q8NEP3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms