Protein–RNA interactions for Protein: Q8N7U7

TPRX1, Tetra-peptide repeat homeobox protein 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1Q8N7U7 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TPRX1Q8N7U7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
TPRX1Q8N7U7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TPRX1Q8N7U7 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TPRX1Q8N7U7 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 SMPD5-203ENST00000639008 1464 ntBASIC20.18■□□□□ 0.82
TPRX1Q8N7U7 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TPRX1Q8N7U7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 AC025884.2-201ENST00000553429 711 ntBASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TPRX1Q8N7U7 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 ECEL1P2-201ENST00000461596 1295 ntBASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
TPRX1Q8N7U7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 AC010501.1-201ENST00000606270 1962 ntBASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TPRX1Q8N7U7 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TPRX1Q8N7U7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 PFN2-211ENST00000489155 636 ntTSL 4 BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.12■□□□□ 0.81
TPRX1Q8N7U7 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TPRX1Q8N7U7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 MIR3960-201ENST00000583311 91 ntBASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TPRX1Q8N7U7 AC096887.2-201ENST00000623443 1957 ntBASIC20.09■□□□□ 0.81
TPRX1Q8N7U7 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TPRX1Q8N7U7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TPRX1Q8N7U7 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TPRX1Q8N7U7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.08■□□□□ 0.81
TPRX1Q8N7U7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPRX1Q8N7U7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TPRX1Q8N7U7 AC020928.2-201ENST00000588717 2197 ntBASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TPRX1Q8N7U7 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms