Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.88■■■□□ 2.69
PTF1AQ7RTS3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
PTF1AQ7RTS3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC31.87■■■□□ 2.69
PTF1AQ7RTS3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
PTF1AQ7RTS3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
PTF1AQ7RTS3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.86■■■□□ 2.69
PTF1AQ7RTS3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 AL139393.2-201ENST00000608721 2025 ntBASIC31.85■■■□□ 2.69
PTF1AQ7RTS3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC31.84■■■□□ 2.69
PTF1AQ7RTS3 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
PTF1AQ7RTS3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC31.83■■■□□ 2.69
PTF1AQ7RTS3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC31.83■■■□□ 2.69
PTF1AQ7RTS3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PTF1AQ7RTS3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
PTF1AQ7RTS3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC31.82■■■□□ 2.68
PTF1AQ7RTS3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC31.81■■■□□ 2.68
PTF1AQ7RTS3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PTF1AQ7RTS3 AL136116.3-201ENST00000402907 1138 ntBASIC31.8■■■□□ 2.68
PTF1AQ7RTS3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
PTF1AQ7RTS3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC31.8■■■□□ 2.68
PTF1AQ7RTS3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
PTF1AQ7RTS3 WHAMMP3-201ENST00000611636 1609 ntBASIC31.79■■■□□ 2.68
PTF1AQ7RTS3 SRR-208ENST00000576848 588 ntTSL 4 BASIC31.79■■■□□ 2.68
PTF1AQ7RTS3 AC005837.3-201ENST00000612163 286 ntBASIC31.79■■■□□ 2.68
PTF1AQ7RTS3 AC021242.3-201ENST00000607598 1377 ntBASIC31.79■■■□□ 2.68
PTF1AQ7RTS3 AC137630.3-201ENST00000607245 391 ntBASIC31.78■■■□□ 2.68
PTF1AQ7RTS3 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PTF1AQ7RTS3 KRT18P24-201ENST00000344739 1156 ntBASIC31.77■■■□□ 2.68
PTF1AQ7RTS3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC31.77■■■□□ 2.68
PTF1AQ7RTS3 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC31.77■■■□□ 2.68
PTF1AQ7RTS3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC31.77■■■□□ 2.68
PTF1AQ7RTS3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PTF1AQ7RTS3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.76■■■□□ 2.68
PTF1AQ7RTS3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC31.76■■■□□ 2.67
PTF1AQ7RTS3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PTF1AQ7RTS3 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
PTF1AQ7RTS3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PTF1AQ7RTS3 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
PTF1AQ7RTS3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.74■■■□□ 2.67
PTF1AQ7RTS3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC31.72■■■□□ 2.67
PTF1AQ7RTS3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
PTF1AQ7RTS3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC31.72■■■□□ 2.67
PTF1AQ7RTS3 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 AC092666.2-201ENST00000613287 246 ntBASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.71■■■□□ 2.67
PTF1AQ7RTS3 AC096631.2-201ENST00000436136 790 ntBASIC31.7■■■□□ 2.67
PTF1AQ7RTS3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC31.7■■■□□ 2.67
PTF1AQ7RTS3 AC092028.1-203ENST00000608262 953 ntBASIC31.7■■■□□ 2.67
PTF1AQ7RTS3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC31.69■■■□□ 2.66
PTF1AQ7RTS3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PTF1AQ7RTS3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
PTF1AQ7RTS3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.68■■■□□ 2.66
PTF1AQ7RTS3 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
PTF1AQ7RTS3 AC022616.5-201ENST00000518796 181 ntBASIC31.68■■■□□ 2.66
PTF1AQ7RTS3 AC120024.1-201ENST00000562672 995 ntBASIC31.68■■■□□ 2.66
PTF1AQ7RTS3 AL117332.1-201ENST00000622628 974 ntBASIC31.68■■■□□ 2.66
PTF1AQ7RTS3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 MIR4466-201ENST00000606121 54 ntBASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
PTF1AQ7RTS3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
PTF1AQ7RTS3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.65■■■□□ 2.66
PTF1AQ7RTS3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.65■■■□□ 2.66
PTF1AQ7RTS3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC31.65■■■□□ 2.66
PTF1AQ7RTS3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PTF1AQ7RTS3 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
PTF1AQ7RTS3 ZNRF2P3-201ENST00000424200 374 ntBASIC31.64■■■□□ 2.66
PTF1AQ7RTS3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
PTF1AQ7RTS3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.63■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms