Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.651e-6■■■■□ 24.1
SRSF1Q07955 HK2-202ENST00000409174 5278 ntTSL 1 (best) BASIC8.73□□□□□ -1.011e-6■■■■□ 24.1
SRSF1Q07955 PHF1-209ENST00000487667 1930 ntTSL 516.59■□□□□ 0.253e-6■■■■□ 24
SRSF1Q07955 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.76□□□□□ -0.213e-6■■■■□ 24
SRSF1Q07955 PHF1-211ENST00000495509 1752 ntTSL 213.5□□□□□ -0.253e-6■■■■□ 24
SRSF1Q07955 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.313e-6■■■■□ 24
SRSF1Q07955 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.445e-7■■■■□ 24
SRSF1Q07955 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.545e-7■■■■□ 24
SRSF1Q07955 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC11.57□□□□□ -0.565e-7■■■■□ 24
SRSF1Q07955 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.735e-7■■■■□ 24
SRSF1Q07955 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.775e-7■■■■□ 24
SRSF1Q07955 LRRC45-204ENST00000582083 527 ntTSL 317.49■□□□□ 0.391e-9■■■■□ 24
SRSF1Q07955 WSB1-212ENST00000583096 834 ntTSL 34.8□□□□□ -1.643e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-206ENST00000490912 5328 ntTSL 212.07□□□□□ -0.482e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-204ENST00000463181 6284 ntTSL 211.51□□□□□ -0.572e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-203ENST00000360787 1724 ntTSL 511.42□□□□□ -0.582e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-202ENST00000356674 1711 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.672e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-208ENST00000618183 3539 ntTSL 5 BASIC8.36□□□□□ -1.072e-9■■■■□ 24
SRSF1Q07955 HNRNPA2B1-201ENST00000354667 3664 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.412e-9■■■■□ 24
SRSF1Q07955 MARS-206ENST00000546971 711 ntTSL 216.23■□□□□ 0.191e-10■■■■□ 24
SRSF1Q07955 ELP2-213ENST00000540730 578 ntTSL 49.9□□□□□ -0.821e-6■■■■□ 23.9
SRSF1Q07955 ELP2-223ENST00000543439 551 ntTSL 46.79□□□□□ -1.321e-6■■■■□ 23.9
SRSF1Q07955 ELP2-212ENST00000540323 577 ntTSL 24.79□□□□□ -1.641e-6■■■■□ 23.9
SRSF1Q07955 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.261e-7■■■■□ 23.8
SRSF1Q07955 RNF207-206ENST00000485539 1413 ntTSL 1 (best)22.38■■□□□ 1.171e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-203ENST00000394925 702 ntTSL 221.12■□□□□ 0.971e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.12■□□□□ 0.971e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-207ENST00000461195 787 ntTSL 221.12■□□□□ 0.971e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-204ENST00000422344 631 ntTSL 321.12■□□□□ 0.971e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.37■□□□□ 0.851e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-206ENST00000449900 580 ntTSL 319.09■□□□□ 0.651e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-216ENST00000586813 789 ntTSL 318.99■□□□□ 0.631e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-215ENST00000567074 884 ntTSL 1 (best)18.53■□□□□ 0.561e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-210ENST00000460313 568 ntTSL 218.04■□□□□ 0.481e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.96■□□□□ 0.471e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-208ENST00000454854 469 ntTSL 417.5■□□□□ 0.391e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-222ENST00000495967 554 ntTSL 417.5■□□□□ 0.391e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-221ENST00000495681 536 ntTSL 517.5■□□□□ 0.391e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-217ENST00000568209 266 ntTSL 516.11■□□□□ 0.171e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.131e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-207ENST00000453160 529 ntTSL 415.68■□□□□ 0.11e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-218ENST00000568288 501 ntTSL 515.58■□□□□ 0.081e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-212ENST00000498540 748 ntTSL 314.84□□□□□ -0.031e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.11e-7■■■■□ 23.8
SRSF1Q07955 MRPL58-204ENST00000584208 593 ntTSL 314.38□□□□□ -0.111e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.111e-7■■■■□ 23.8
SRSF1Q07955 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.171e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.211e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.42□□□□□ -0.261e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.311e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-209ENST00000473421 585 ntTSL 312.86□□□□□ -0.351e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-215ENST00000584944 825 ntTSL 212.86□□□□□ -0.351e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.361e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC11.84□□□□□ -0.511e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.531e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-211ENST00000462454 491 ntTSL 311.63□□□□□ -0.551e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-210ENST00000475329 544 ntTSL 311.39□□□□□ -0.591e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.731e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.81e-7■■■■□ 23.8
SRSF1Q07955 TRAF4-206ENST00000454852 672 ntTSL 39.81□□□□□ -0.841e-7■■■■□ 23.8
SRSF1Q07955 MRPL58-202ENST00000580800 513 ntTSL 39.57□□□□□ -0.881e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-209ENST00000458594 2753 ntTSL 58.79□□□□□ -11e-7■■■■□ 23.8
SRSF1Q07955 UBE2I-214ENST00000566775 396 ntTSL 38.7□□□□□ -1.021e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-205ENST00000431535 873 ntTSL 58.26□□□□□ -1.091e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-204ENST00000412689 742 ntTSL 37.41□□□□□ -1.221e-7■■■■□ 23.8
SRSF1Q07955 ASCC2-214ENST00000465667 876 ntTSL 37.41□□□□□ -1.221e-7■■■■□ 23.8
SRSF1Q07955 TAPT1-206ENST00000505317 1376 ntTSL 222.77■■□□□ 1.242e-7■■■■□ 23.8
SRSF1Q07955 TAPT1-207ENST00000505603 1634 ntTSL 218.93■□□□□ 0.622e-7■■■■□ 23.8
SRSF1Q07955 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.032e-7■■■■□ 23.8
SRSF1Q07955 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC13.83□□□□□ -0.24e-7■■■■□ 23.8
SRSF1Q07955 GUSBP1-201ENST00000449061 758 ntBASIC11.01□□□□□ -0.654e-7■■■■□ 23.8
SRSF1Q07955 TAPT1-215ENST00000513359 749 ntTSL 57.79□□□□□ -1.162e-7■■■■□ 23.8
SRSF1Q07955 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC5.64□□□□□ -1.514e-7■■■■□ 23.8
SRSF1Q07955 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.522e-7■■■■□ 23.8
SRSF1Q07955 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.862e-7■■■■□ 23.8
SRSF1Q07955 MIDN-202ENST00000586757 1163 ntAPPRIS ALT2 TSL 522.82■■□□□ 1.245e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-202ENST00000359107 954 ntTSL 319.26■□□□□ 0.675e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-204ENST00000423607 2007 ntTSL 214.78□□□□□ -0.045e-8■■■■□ 23.8
SRSF1Q07955 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.085e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.255e-8■■■■□ 23.8
SRSF1Q07955 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.315e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-208ENST00000461101 2363 ntTSL 1 (best)12.44□□□□□ -0.425e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-212ENST00000484725 468 ntTSL 28.66□□□□□ -1.025e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-206ENST00000429519 1798 ntTSL 56.36□□□□□ -1.395e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.3□□□□□ -1.45e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.485e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-205ENST00000429335 786 ntTSL 1 (best)5.05□□□□□ -1.65e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-211ENST00000475291 954 ntTSL 24.99□□□□□ -1.615e-8■■■■□ 23.8
SRSF1Q07955 MTHFD2L-214ENST00000490698 689 ntTSL 24.49□□□□□ -1.695e-8■■■■□ 23.8
SRSF1Q07955 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.384e-7■■■■□ 23.8
SRSF1Q07955 MICAL3-210ENST00000495076 5113 ntTSL 59.39□□□□□ -0.917e-7■■■■□ 23.8
SRSF1Q07955 MICAL3-203ENST00000400561 3046 ntTSL 1 (best) BASIC8.88□□□□□ -0.997e-7■■■■□ 23.8
SRSF1Q07955 MICAL3-204ENST00000414725 4756 ntTSL 5 BASIC8.66□□□□□ -1.027e-7■■■■□ 23.8
SRSF1Q07955 MICAL3-202ENST00000383094 2963 ntTSL 1 (best) BASIC8.19□□□□□ -1.17e-7■■■■□ 23.8
SRSF1Q07955 MICAL3-219ENST00000585038 3323 ntTSL 1 (best) BASIC6.49□□□□□ -1.377e-7■■■■□ 23.8
SRSF1Q07955 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.243e-7■■■■□ 23.7
SRSF1Q07955 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.143e-7■■■■□ 23.7
SRSF1Q07955 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.083e-7■■■■□ 23.7
SRSF1Q07955 AC004381.2-201ENST00000637768 1329 ntBASIC8.74□□□□□ -1.013e-6■■■■□ 23.7
SRSF1Q07955 PHF19-213ENST00000487555 1092 ntTSL 1 (best)14.45□□□□□ -0.15e-6■■■■□ 23.7
Retrieved 100 of 14,836 protein–RNA pairs in 522.3 ms