Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-5P52952 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NKX2-5P52952 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-5P52952 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
NKX2-5P52952 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
NKX2-5P52952 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
NKX2-5P52952 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-5P52952 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-5P52952 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NKX2-5P52952 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.7■□□□□ 0.9
NKX2-5P52952 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-5P52952 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.7■□□□□ 0.9
NKX2-5P52952 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.7■□□□□ 0.9
NKX2-5P52952 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NKX2-5P52952 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX2-5P52952 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.7■□□□□ 0.9
NKX2-5P52952 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NKX2-5P52952 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
NKX2-5P52952 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-5P52952 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-5P52952 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NKX2-5P52952 INO80B-203ENST00000409917 796 ntTSL 2 BASIC20.68■□□□□ 0.9
NKX2-5P52952 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-5P52952 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-5P52952 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.67■□□□□ 0.9
NKX2-5P52952 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-5P52952 AC015813.7-201ENST00000623294 581 ntBASIC20.67■□□□□ 0.9
NKX2-5P52952 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-5P52952 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-5P52952 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
NKX2-5P52952 LINC01124-201ENST00000409786 2117 ntBASIC20.66■□□□□ 0.9
NKX2-5P52952 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-5P52952 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-5P52952 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NKX2-5P52952 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-5P52952 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-5P52952 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NKX2-5P52952 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NKX2-5P52952 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 AL117328.2-201ENST00000624617 1940 ntBASIC20.65■□□□□ 0.9
NKX2-5P52952 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.65■□□□□ 0.9
NKX2-5P52952 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.65■□□□□ 0.9
NKX2-5P52952 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NKX2-5P52952 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.64■□□□□ 0.9
NKX2-5P52952 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-5P52952 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-5P52952 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.64■□□□□ 0.89
NKX2-5P52952 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-5P52952 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
NKX2-5P52952 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-5P52952 EP400NL-214ENST00000641289 2402 ntBASIC20.64■□□□□ 0.89
NKX2-5P52952 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NKX2-5P52952 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-5P52952 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-5P52952 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.63■□□□□ 0.89
NKX2-5P52952 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
NKX2-5P52952 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
NKX2-5P52952 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.63■□□□□ 0.89
NKX2-5P52952 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-5P52952 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NKX2-5P52952 AP002414.2-202ENST00000590929 1450 ntBASIC20.62■□□□□ 0.89
NKX2-5P52952 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX2-5P52952 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.62■□□□□ 0.89
NKX2-5P52952 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.62■□□□□ 0.89
NKX2-5P52952 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NKX2-5P52952 C1orf229-201ENST00000623686 2258 ntBASIC20.62■□□□□ 0.89
NKX2-5P52952 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NKX2-5P52952 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.62■□□□□ 0.89
NKX2-5P52952 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-5P52952 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-5P52952 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-5P52952 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-5P52952 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NKX2-5P52952 AP004609.3-201ENST00000610705 1884 ntBASIC20.6■□□□□ 0.89
NKX2-5P52952 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.6■□□□□ 0.89
NKX2-5P52952 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NKX2-5P52952 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
NKX2-5P52952 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
NKX2-5P52952 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
NKX2-5P52952 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.58■□□□□ 0.89
NKX2-5P52952 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX2-5P52952 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.58■□□□□ 0.88
NKX2-5P52952 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
NKX2-5P52952 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-5P52952 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
NKX2-5P52952 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.57■□□□□ 0.88
NKX2-5P52952 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
NKX2-5P52952 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
NKX2-5P52952 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
NKX2-5P52952 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms