Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.2■■□□□ 1.94
CPT1AP50416 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CPT1AP50416 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.19■■□□□ 1.94
CPT1AP50416 THA1P-201ENST00000590384 1145 ntBASIC27.19■■□□□ 1.94
CPT1AP50416 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
CPT1AP50416 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
CPT1AP50416 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC27.18■■□□□ 1.94
CPT1AP50416 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
CPT1AP50416 LINC01003-201ENST00000564834 1764 ntBASIC27.18■■□□□ 1.94
CPT1AP50416 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPT1AP50416 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.18■■□□□ 1.94
CPT1AP50416 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CPT1AP50416 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CPT1AP50416 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CPT1AP50416 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CPT1AP50416 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC27.17■■□□□ 1.94
CPT1AP50416 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
CPT1AP50416 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC27.16■■□□□ 1.94
CPT1AP50416 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CPT1AP50416 AC239859.2-201ENST00000444165 318 ntBASIC27.15■■□□□ 1.94
CPT1AP50416 Z92544.1-202ENST00000571933 1220 ntBASIC27.15■■□□□ 1.94
CPT1AP50416 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CPT1AP50416 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CPT1AP50416 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
CPT1AP50416 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC27.14■■□□□ 1.94
CPT1AP50416 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
CPT1AP50416 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
CPT1AP50416 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC27.13■■□□□ 1.93
CPT1AP50416 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 AL356441.2-201ENST00000443009 864 ntBASIC27.13■■□□□ 1.93
CPT1AP50416 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC27.13■■□□□ 1.93
CPT1AP50416 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 AC022616.5-201ENST00000518796 181 ntBASIC27.13■■□□□ 1.93
CPT1AP50416 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CPT1AP50416 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.13■■□□□ 1.93
CPT1AP50416 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC27.12■■□□□ 1.93
CPT1AP50416 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC27.12■■□□□ 1.93
CPT1AP50416 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CPT1AP50416 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
CPT1AP50416 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC27.11■■□□□ 1.93
CPT1AP50416 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
CPT1AP50416 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CPT1AP50416 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CPT1AP50416 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CPT1AP50416 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
CPT1AP50416 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
CPT1AP50416 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
CPT1AP50416 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC27.09■■□□□ 1.93
CPT1AP50416 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC27.09■■□□□ 1.93
CPT1AP50416 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPT1AP50416 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC27.09■■□□□ 1.93
CPT1AP50416 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.09■■□□□ 1.93
CPT1AP50416 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPT1AP50416 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CPT1AP50416 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
CPT1AP50416 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC27.08■■□□□ 1.93
CPT1AP50416 AC139426.1-201ENST00000568218 2529 ntBASIC27.08■■□□□ 1.93
CPT1AP50416 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.08■■□□□ 1.93
CPT1AP50416 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CPT1AP50416 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
CPT1AP50416 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC27.08■■□□□ 1.93
CPT1AP50416 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
CPT1AP50416 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPT1AP50416 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CPT1AP50416 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC27.07■■□□□ 1.92
CPT1AP50416 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC27.07■■□□□ 1.92
CPT1AP50416 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
CPT1AP50416 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPT1AP50416 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
CPT1AP50416 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPT1AP50416 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPT1AP50416 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
CPT1AP50416 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
CPT1AP50416 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.06■■□□□ 1.92
CPT1AP50416 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC27.06■■□□□ 1.92
CPT1AP50416 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC27.06■■□□□ 1.92
CPT1AP50416 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
CPT1AP50416 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPT1AP50416 BX255925.1-201ENST00000566954 1854 ntBASIC27.05■■□□□ 1.92
CPT1AP50416 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPT1AP50416 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC27.05■■□□□ 1.92
CPT1AP50416 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.05■■□□□ 1.92
CPT1AP50416 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPT1AP50416 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPT1AP50416 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CPT1AP50416 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CPT1AP50416 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CPT1AP50416 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
CPT1AP50416 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.03■■□□□ 1.92
CPT1AP50416 KRT125P-201ENST00000546827 989 ntBASIC27.03■■□□□ 1.92
CPT1AP50416 AC142472.1-201ENST00000612013 1741 ntBASIC27.02■■□□□ 1.92
CPT1AP50416 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CPT1AP50416 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC27.02■■□□□ 1.92
CPT1AP50416 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CPT1AP50416 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CPT1AP50416 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CPT1AP50416 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms