Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YPT1YFL038C 621 nt6.39□□□□□ -1.39
UPF3P48412 ATG36YJL185C 882 nt6.39□□□□□ -1.39
UPF3P48412 ARO7YPR060C 771 nt6.39□□□□□ -1.39
UPF3P48412 NMT1YLR195C 1368 nt6.39□□□□□ -1.39
UPF3P48412 HXT2YMR011W 1626 nt6.39□□□□□ -1.39
UPF3P48412 EDE1YBL047C 4146 nt6.39□□□□□ -1.39
UPF3P48412 DDC1YPL194W 1839 nt6.39□□□□□ -1.39
UPF3P48412 YPR204WYPR204W 3099 nt6.38□□□□□ -1.39
UPF3P48412 RDL1YOR285W 420 nt6.38□□□□□ -1.39
UPF3P48412 CYC8YBR112C 2901 nt6.38□□□□□ -1.39
UPF3P48412 ASN1YPR145W 1719 nt6.37□□□□□ -1.39
UPF3P48412 NOG2YNR053C 1461 nt6.37□□□□□ -1.39
UPF3P48412 COX10YPL172C 1389 nt6.37□□□□□ -1.39
UPF3P48412 HOC1YJR075W 1191 nt6.37□□□□□ -1.39
UPF3P48412 CBT1YKL208W 816 nt6.37□□□□□ -1.39
UPF3P48412 COX5AYNL052W 462 nt6.37□□□□□ -1.39
UPF3P48412 RDL2YOR286W 450 nt6.37□□□□□ -1.39
UPF3P48412 ECM2YBR065C 1095 nt6.37□□□□□ -1.39
UPF3P48412 DOT1YDR440W 1749 nt6.36□□□□□ -1.39
UPF3P48412 CRH1YGR189C 1524 nt6.36□□□□□ -1.39
UPF3P48412 RFC4YOL094C 972 nt6.36□□□□□ -1.39
UPF3P48412 FMP40YPL222W 2067 nt6.35□□□□□ -1.39
UPF3P48412 VMS1YDR049W 1899 nt6.35□□□□□ -1.39
UPF3P48412 YKL077WYKL077W 1179 nt6.35□□□□□ -1.39
UPF3P48412 SES1YDR023W 1389 nt6.34□□□□□ -1.39
UPF3P48412 IVY1YDR229W 1362 nt6.34□□□□□ -1.39
UPF3P48412 YGL072CYGL072C 360 nt6.34□□□□□ -1.39
UPF3P48412 FBA1YKL060C 1080 nt6.34□□□□□ -1.39
UPF3P48412 YPL250W-AYPL250W-A 288 nt6.34□□□□□ -1.39
UPF3P48412 YMR155WYMR155W 1644 nt6.34□□□□□ -1.39
UPF3P48412 SKI2YLR398C 3864 nt6.33□□□□□ -1.4
UPF3P48412 SLX5YDL013W 1860 nt6.33□□□□□ -1.4
UPF3P48412 SNF11YDR073W 510 nt6.33□□□□□ -1.4
UPF3P48412 LIA1YJR070C 978 nt6.33□□□□□ -1.4
UPF3P48412 PRP40YKL012W 1752 nt6.32□□□□□ -1.4
UPF3P48412 ARA2YMR041C 1008 nt6.32□□□□□ -1.4
UPF3P48412 THI2YBR240C 1353 nt6.31□□□□□ -1.4
UPF3P48412 EAF5YEL018W 840 nt6.31□□□□□ -1.4
UPF3P48412 FMO1YHR176W 1299 nt6.31□□□□□ -1.4
UPF3P48412 SQT1YIR012W 1296 nt6.31□□□□□ -1.4
UPF3P48412 KSH1YNL024C-A 219 nt6.31□□□□□ -1.4
UPF3P48412 YNL120CYNL120C 486 nt6.31□□□□□ -1.4
UPF3P48412 YPL257WYPL257W 582 nt6.31□□□□□ -1.4
UPF3P48412 PHO3YBR092C 1404 nt6.31□□□□□ -1.4
UPF3P48412 TRP5YGL026C 2124 nt6.31□□□□□ -1.4
UPF3P48412 YHK8YHR048W 1545 nt6.3□□□□□ -1.4
UPF3P48412 MSY1YPL097W 1479 nt6.3□□□□□ -1.4
UPF3P48412 FPR2YDR519W 408 nt6.3□□□□□ -1.4
UPF3P48412 HEM2YGL040C 1029 nt6.3□□□□□ -1.4
UPF3P48412 RPP1YHR062C 882 nt6.3□□□□□ -1.4
UPF3P48412 ASF1YJL115W 840 nt6.3□□□□□ -1.4
UPF3P48412 YJR146WYJR146W 354 nt6.3□□□□□ -1.4
UPF3P48412 RNH1YMR234W 1047 nt6.3□□□□□ -1.4
UPF3P48412 YOR111WYOR111W 699 nt6.3□□□□□ -1.4
UPF3P48412 LSC1YOR142W 990 nt6.3□□□□□ -1.4
UPF3P48412 MRPL23YOR150W 492 nt6.3□□□□□ -1.4
UPF3P48412 ARG81YML099C 2643 nt6.29□□□□□ -1.4
UPF3P48412 MKC7YDR144C 1791 nt6.29□□□□□ -1.4
UPF3P48412 UTR2YEL040W 1404 nt6.29□□□□□ -1.4
UPF3P48412 COS6YGR295C 1146 nt6.29□□□□□ -1.4
UPF3P48412 DID2YKR035W-A 615 nt6.29□□□□□ -1.4
UPF3P48412 TAF11YML015C 1041 nt6.29□□□□□ -1.4
UPF3P48412 CYS4YGR155W 1524 nt6.29□□□□□ -1.4
UPF3P48412 PTR2YKR093W 1806 nt6.28□□□□□ -1.4
UPF3P48412 FAL1YDR021W 1200 nt6.28□□□□□ -1.4
UPF3P48412 YNL092WYNL092W 1203 nt6.28□□□□□ -1.4
UPF3P48412 HAL1YPR005C 885 nt6.28□□□□□ -1.4
UPF3P48412 RCK1YGL158W 1539 nt6.28□□□□□ -1.4
UPF3P48412 GLN3YER040W 2193 nt6.28□□□□□ -1.4
UPF3P48412 PEX3YDR329C 1326 nt6.27□□□□□ -1.41
UPF3P48412 PDR18YNR070W 4002 nt6.27□□□□□ -1.41
UPF3P48412 IMA2YOL157C 1770 nt6.27□□□□□ -1.41
UPF3P48412 POP1YNL221C 2628 nt6.27□□□□□ -1.41
UPF3P48412 YRB2YIL063C 984 nt6.27□□□□□ -1.41
UPF3P48412 YKR073CYKR073C 321 nt6.27□□□□□ -1.41
UPF3P48412 YLR123CYLR123C 330 nt6.27□□□□□ -1.41
UPF3P48412 YLR312CYLR312C 1197 nt6.27□□□□□ -1.41
UPF3P48412 AIM33YML087C 939 nt6.27□□□□□ -1.41
UPF3P48412 GTT3YEL017W 1014 nt6.26□□□□□ -1.41
UPF3P48412 LCL3YGL085W 825 nt6.26□□□□□ -1.41
UPF3P48412 AIM24YJR080C 1185 nt6.26□□□□□ -1.41
UPF3P48412 YNL200CYNL200C 741 nt6.26□□□□□ -1.41
UPF3P48412 HXK2YGL253W 1461 nt6.26□□□□□ -1.41
UPF3P48412 AVT4YNL101W 2142 nt6.25□□□□□ -1.41
UPF3P48412 EFT2YDR385W 2529 nt6.25□□□□□ -1.41
UPF3P48412 EFT1YOR133W 2529 nt6.25□□□□□ -1.41
UPF3P48412 GPD1YDL022W 1176 nt6.25□□□□□ -1.41
UPF3P48412 ADK2YER170W 678 nt6.25□□□□□ -1.41
UPF3P48412 OGG1YML060W 1131 nt6.25□□□□□ -1.41
UPF3P48412 RKI1YOR095C 777 nt6.25□□□□□ -1.41
UPF3P48412 CDS1YBR029C 1374 nt6.25□□□□□ -1.41
UPF3P48412 UTP9YHR196W 1728 nt6.25□□□□□ -1.41
UPF3P48412 SAL1YNL083W 1485 nt6.24□□□□□ -1.41
UPF3P48412 CDC34YDR054C 888 nt6.24□□□□□ -1.41
UPF3P48412 YIL029W-AYIL029W-A 372 nt6.24□□□□□ -1.41
UPF3P48412 COQ3YOL096C 939 nt6.24□□□□□ -1.41
UPF3P48412 FET3YMR058W 1911 nt6.24□□□□□ -1.41
UPF3P48412 HIS7YBR248C 1659 nt6.23□□□□□ -1.41
UPF3P48412 CLB4YLR210W 1383 nt6.23□□□□□ -1.41
UPF3P48412 YGR127WYGR127W 939 nt6.23□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 70.6 ms