Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 AC025884.2-201ENST00000553429 711 ntBASIC21.35■■□□□ 1.01
MSR1P21757 AC010501.1-201ENST00000606270 1962 ntBASIC21.35■■□□□ 1.01
MSR1P21757 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
MSR1P21757 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSR1P21757 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.34■■□□□ 1.01
MSR1P21757 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
MSR1P21757 ERN1-208ENST00000606895 2068 ntBASIC21.34■■□□□ 1.01
MSR1P21757 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSR1P21757 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
MSR1P21757 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSR1P21757 REST-210ENST00000638187 1334 ntTSL 5 BASIC21.33■■□□□ 1.01
MSR1P21757 ECEL1P2-201ENST00000461596 1295 ntBASIC21.33■■□□□ 1.01
MSR1P21757 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.33■■□□□ 1.01
MSR1P21757 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
MSR1P21757 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSR1P21757 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
MSR1P21757 SMPD5-203ENST00000639008 1464 ntBASIC21.32■■□□□ 1
MSR1P21757 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.32■■□□□ 1
MSR1P21757 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MSR1P21757 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MSR1P21757 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MSR1P21757 MIR3960-201ENST00000583311 91 ntBASIC21.32■■□□□ 1
MSR1P21757 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
MSR1P21757 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.31■■□□□ 1
MSR1P21757 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MSR1P21757 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.31■■□□□ 1
MSR1P21757 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.3■■□□□ 1
MSR1P21757 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.3■■□□□ 1
MSR1P21757 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSR1P21757 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSR1P21757 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSR1P21757 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC21.3■■□□□ 1
MSR1P21757 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.3■■□□□ 1
MSR1P21757 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
MSR1P21757 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.29■■□□□ 1
MSR1P21757 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MSR1P21757 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSR1P21757 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSR1P21757 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MSR1P21757 GPX1-201ENST00000419349 1106 ntBASIC21.29■■□□□ 1
MSR1P21757 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MSR1P21757 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSR1P21757 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSR1P21757 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSR1P21757 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.28■■□□□ 1
MSR1P21757 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.28■■□□□ 1
MSR1P21757 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MSR1P21757 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.28■■□□□ 1
MSR1P21757 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC21.28■■□□□ 1
MSR1P21757 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MSR1P21757 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSR1P21757 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MSR1P21757 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
MSR1P21757 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSR1P21757 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.27■■□□□ 1
MSR1P21757 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.27■■□□□ 1
MSR1P21757 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.27■■□□□ 1
MSR1P21757 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSR1P21757 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.26■□□□□ 0.99
MSR1P21757 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
MSR1P21757 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSR1P21757 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSR1P21757 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.25■□□□□ 0.99
MSR1P21757 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
MSR1P21757 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSR1P21757 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSR1P21757 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MSR1P21757 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSR1P21757 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.24■□□□□ 0.99
MSR1P21757 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSR1P21757 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSR1P21757 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.24■□□□□ 0.99
MSR1P21757 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
MSR1P21757 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.23■□□□□ 0.99
MSR1P21757 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MSR1P21757 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
MSR1P21757 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSR1P21757 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSR1P21757 RP9P-202ENST00000450133 1212 ntBASIC21.22■□□□□ 0.99
MSR1P21757 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.22■□□□□ 0.99
MSR1P21757 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MSR1P21757 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.22■□□□□ 0.99
MSR1P21757 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSR1P21757 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
MSR1P21757 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.21■□□□□ 0.99
MSR1P21757 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.21■□□□□ 0.99
MSR1P21757 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MSR1P21757 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.21■□□□□ 0.99
MSR1P21757 AC096887.2-201ENST00000623443 1957 ntBASIC21.21■□□□□ 0.99
MSR1P21757 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.99
MSR1P21757 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
MSR1P21757 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSR1P21757 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MSR1P21757 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.2■□□□□ 0.98
MSR1P21757 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC21.2■□□□□ 0.98
MSR1P21757 AC007029.1-201ENST00000604183 313 ntBASIC21.2■□□□□ 0.98
MSR1P21757 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSR1P21757 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MSR1P21757 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.19■□□□□ 0.98
MSR1P21757 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms