Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 WHAMMP3-201ENST00000611636 1609 ntBASIC21.58■■□□□ 1.04
HLA-DPB1P04440 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 CR559946.2-201ENST00000623684 991 ntBASIC21.57■■□□□ 1.04
HLA-DPB1P04440 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DPB1P04440 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DPB1P04440 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DPB1P04440 AL139125.2-201ENST00000623134 1869 ntBASIC21.54■■□□□ 1.04
HLA-DPB1P04440 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 AC022211.4-201ENST00000625094 2161 ntBASIC21.54■■□□□ 1.04
HLA-DPB1P04440 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DPB1P04440 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.53■■□□□ 1.04
HLA-DPB1P04440 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DPB1P04440 MIR3648-2-201ENST00000581792 180 ntBASIC21.53■■□□□ 1.04
HLA-DPB1P04440 MIR3648-1-201ENST00000615959 180 ntBASIC21.53■■□□□ 1.04
HLA-DPB1P04440 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
HLA-DPB1P04440 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DPB1P04440 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
HLA-DPB1P04440 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 AC016575.1-201ENST00000607026 382 ntBASIC21.51■■□□□ 1.03
HLA-DPB1P04440 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 AC138932.3-201ENST00000567634 1902 ntBASIC21.51■■□□□ 1.03
HLA-DPB1P04440 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HLA-DPB1P04440 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.5■■□□□ 1.03
HLA-DPB1P04440 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
HLA-DPB1P04440 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.49■■□□□ 1.03
HLA-DPB1P04440 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DPB1P04440 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DPB1P04440 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DPB1P04440 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.48■■□□□ 1.03
HLA-DPB1P04440 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HLA-DPB1P04440 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
HLA-DPB1P04440 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
HLA-DPB1P04440 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms