Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TGFAP01135 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TGFAP01135 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TGFAP01135 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TGFAP01135 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TGFAP01135 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TGFAP01135 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TGFAP01135 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TGFAP01135 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TGFAP01135 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20■□□□□ 0.79
TGFAP01135 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20■□□□□ 0.79
TGFAP01135 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TGFAP01135 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TGFAP01135 AC019069.1-201ENST00000610008 1333 ntBASIC20■□□□□ 0.79
TGFAP01135 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TGFAP01135 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TGFAP01135 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.99■□□□□ 0.79
TGFAP01135 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TGFAP01135 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TGFAP01135 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TGFAP01135 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
TGFAP01135 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
TGFAP01135 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TGFAP01135 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.98■□□□□ 0.79
TGFAP01135 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TGFAP01135 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TGFAP01135 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TGFAP01135 KRT18P10-201ENST00000388836 1287 ntBASIC19.98■□□□□ 0.79
TGFAP01135 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TGFAP01135 Z92544.1-202ENST00000571933 1220 ntBASIC19.98■□□□□ 0.79
TGFAP01135 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.98■□□□□ 0.79
TGFAP01135 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
TGFAP01135 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TGFAP01135 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TGFAP01135 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TGFAP01135 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.97■□□□□ 0.79
TGFAP01135 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.97■□□□□ 0.79
TGFAP01135 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TGFAP01135 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TGFAP01135 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TGFAP01135 KRT125P-201ENST00000546827 989 ntBASIC19.96■□□□□ 0.79
TGFAP01135 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.96■□□□□ 0.79
TGFAP01135 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TGFAP01135 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TGFAP01135 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.95■□□□□ 0.78
TGFAP01135 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TGFAP01135 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TGFAP01135 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TGFAP01135 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TGFAP01135 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TGFAP01135 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TGFAP01135 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.94■□□□□ 0.78
TGFAP01135 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TGFAP01135 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.94■□□□□ 0.78
TGFAP01135 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TGFAP01135 AL449106.1-201ENST00000608517 1980 ntBASIC19.94■□□□□ 0.78
TGFAP01135 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFAP01135 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFAP01135 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TGFAP01135 AC022616.5-201ENST00000518796 181 ntBASIC19.93■□□□□ 0.78
TGFAP01135 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFAP01135 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFAP01135 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TGFAP01135 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TGFAP01135 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.93■□□□□ 0.78
TGFAP01135 BX664725.1-201ENST00000438252 379 ntBASIC19.92■□□□□ 0.78
TGFAP01135 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TGFAP01135 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.92■□□□□ 0.78
TGFAP01135 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.92■□□□□ 0.78
TGFAP01135 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
TGFAP01135 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFAP01135 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFAP01135 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TGFAP01135 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
TGFAP01135 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFAP01135 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TGFAP01135 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TGFAP01135 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TGFAP01135 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TGFAP01135 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.9■□□□□ 0.78
TGFAP01135 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
TGFAP01135 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.9■□□□□ 0.78
TGFAP01135 MIR4787-201ENST00000607364 84 ntBASIC19.9■□□□□ 0.78
TGFAP01135 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TGFAP01135 AC008406.3-201ENST00000620001 1374 ntBASIC19.9■□□□□ 0.78
TGFAP01135 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TGFAP01135 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TGFAP01135 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TGFAP01135 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TGFAP01135 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TGFAP01135 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TGFAP01135 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.89■□□□□ 0.77
TGFAP01135 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.88■□□□□ 0.77
TGFAP01135 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
TGFAP01135 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.88■□□□□ 0.77
TGFAP01135 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TGFAP01135 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TGFAP01135 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms