Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTP4A3O75365 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PTP4A3O75365 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
PTP4A3O75365 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.83■■□□□ 1.09
PTP4A3O75365 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.83■■□□□ 1.09
PTP4A3O75365 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PTP4A3O75365 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTP4A3O75365 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PTP4A3O75365 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTP4A3O75365 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
PTP4A3O75365 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
PTP4A3O75365 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.82■■□□□ 1.08
PTP4A3O75365 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PTP4A3O75365 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PTP4A3O75365 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.82■■□□□ 1.08
PTP4A3O75365 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PTP4A3O75365 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.82■■□□□ 1.08
PTP4A3O75365 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
PTP4A3O75365 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.81■■□□□ 1.08
PTP4A3O75365 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
PTP4A3O75365 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.81■■□□□ 1.08
PTP4A3O75365 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC21.8■■□□□ 1.08
PTP4A3O75365 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
PTP4A3O75365 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A3O75365 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PTP4A3O75365 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.79■■□□□ 1.08
PTP4A3O75365 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A3O75365 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A3O75365 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A3O75365 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
PTP4A3O75365 AC142381.3-201ENST00000568208 1670 ntBASIC21.79■■□□□ 1.08
PTP4A3O75365 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 AC126177.7-201ENST00000547904 679 ntBASIC21.78■■□□□ 1.08
PTP4A3O75365 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.78■■□□□ 1.08
PTP4A3O75365 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PTP4A3O75365 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.77■■□□□ 1.08
PTP4A3O75365 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.77■■□□□ 1.08
PTP4A3O75365 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.77■■□□□ 1.08
PTP4A3O75365 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PTP4A3O75365 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PTP4A3O75365 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.76■■□□□ 1.07
PTP4A3O75365 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
PTP4A3O75365 AC016575.1-201ENST00000607026 382 ntBASIC21.76■■□□□ 1.07
PTP4A3O75365 AC022211.4-201ENST00000625094 2161 ntBASIC21.75■■□□□ 1.07
PTP4A3O75365 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.75■■□□□ 1.07
PTP4A3O75365 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PTP4A3O75365 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
PTP4A3O75365 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 AC093323.1-202ENST00000635031 2045 ntBASIC21.74■■□□□ 1.07
PTP4A3O75365 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.74■■□□□ 1.07
PTP4A3O75365 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
PTP4A3O75365 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
PTP4A3O75365 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PTP4A3O75365 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PTP4A3O75365 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTP4A3O75365 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTP4A3O75365 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PTP4A3O75365 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PTP4A3O75365 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.73■■□□□ 1.07
PTP4A3O75365 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
PTP4A3O75365 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.72■■□□□ 1.07
PTP4A3O75365 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PTP4A3O75365 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC21.71■■□□□ 1.07
PTP4A3O75365 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
PTP4A3O75365 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.71■■□□□ 1.07
PTP4A3O75365 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PTP4A3O75365 AC138932.3-201ENST00000567634 1902 ntBASIC21.7■■□□□ 1.07
PTP4A3O75365 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PTP4A3O75365 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.7■■□□□ 1.06
PTP4A3O75365 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PTP4A3O75365 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
PTP4A3O75365 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC21.7■■□□□ 1.06
PTP4A3O75365 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTP4A3O75365 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.69■■□□□ 1.06
PTP4A3O75365 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PTP4A3O75365 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.69■■□□□ 1.06
PTP4A3O75365 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PTP4A3O75365 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms