Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSX5O60225 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX5O60225 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX5O60225 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSX5O60225 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.52■□□□□ 0.88
SSX5O60225 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.52■□□□□ 0.88
SSX5O60225 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.52■□□□□ 0.87
SSX5O60225 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSX5O60225 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX5O60225 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX5O60225 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX5O60225 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX5O60225 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSX5O60225 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.51■□□□□ 0.87
SSX5O60225 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX5O60225 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSX5O60225 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
SSX5O60225 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX5O60225 AP006261.1-201ENST00000584783 668 ntBASIC20.5■□□□□ 0.87
SSX5O60225 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.5■□□□□ 0.87
SSX5O60225 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SSX5O60225 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
SSX5O60225 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX5O60225 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX5O60225 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSX5O60225 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.49■□□□□ 0.87
SSX5O60225 AC096887.2-201ENST00000623443 1957 ntBASIC20.49■□□□□ 0.87
SSX5O60225 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX5O60225 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.49■□□□□ 0.87
SSX5O60225 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
SSX5O60225 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SSX5O60225 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSX5O60225 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
SSX5O60225 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SSX5O60225 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.48■□□□□ 0.87
SSX5O60225 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.48■□□□□ 0.87
SSX5O60225 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSX5O60225 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SSX5O60225 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.48■□□□□ 0.87
SSX5O60225 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.47■□□□□ 0.87
SSX5O60225 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
SSX5O60225 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.47■□□□□ 0.87
SSX5O60225 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SSX5O60225 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX5O60225 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX5O60225 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSX5O60225 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX5O60225 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX5O60225 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.46■□□□□ 0.87
SSX5O60225 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSX5O60225 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.46■□□□□ 0.87
SSX5O60225 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX5O60225 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX5O60225 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX5O60225 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
SSX5O60225 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX5O60225 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SSX5O60225 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.44■□□□□ 0.86
SSX5O60225 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.44■□□□□ 0.86
SSX5O60225 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX5O60225 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX5O60225 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SSX5O60225 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSX5O60225 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.44■□□□□ 0.86
SSX5O60225 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX5O60225 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX5O60225 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX5O60225 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SSX5O60225 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX5O60225 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX5O60225 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX5O60225 AC021231.2-201ENST00000594613 730 ntBASIC20.43■□□□□ 0.86
SSX5O60225 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX5O60225 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX5O60225 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
SSX5O60225 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX5O60225 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX5O60225 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX5O60225 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.42■□□□□ 0.86
SSX5O60225 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SSX5O60225 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms