Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV5A0A0B4J249 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV5A0A0B4J249 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV5A0A0B4J249 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV5A0A0B4J249 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV5A0A0B4J249 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.66■□□□□ 0.58
TRAV5A0A0B4J249 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV5A0A0B4J249 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.65■□□□□ 0.58
TRAV5A0A0B4J249 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV5A0A0B4J249 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV5A0A0B4J249 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV5A0A0B4J249 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC18.63■□□□□ 0.57
TRAV5A0A0B4J249 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV5A0A0B4J249 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV5A0A0B4J249 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV5A0A0B4J249 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV5A0A0B4J249 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV5A0A0B4J249 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRAV5A0A0B4J249 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRAV5A0A0B4J249 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 MIR219A2-201ENST00000608502 1504 ntBASIC18.58■□□□□ 0.56
TRAV5A0A0B4J249 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRAV5A0A0B4J249 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms