Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 MIR6090-201ENST00000622481 60 ntBASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 EI24-212ENST00000615917 1407 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV9-2A0A087WT02 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV9-2A0A087WT02 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV9-2A0A087WT02 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV9-2A0A087WT02 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV9-2A0A087WT02 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV9-2A0A087WT02 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV9-2A0A087WT02 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV9-2A0A087WT02 AC010864.1-201ENST00000609407 1511 ntBASIC17.77■□□□□ 0.43
TRAV9-2A0A087WT02 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV9-2A0A087WT02 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV9-2A0A087WT02 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV9-2A0A087WT02 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 ZNRF2P2-203ENST00000454624 420 ntBASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 AC021231.2-201ENST00000594613 730 ntBASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRAV9-2A0A087WT02 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 MIR7108-201ENST00000614319 87 ntBASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TRAV9-2A0A087WT02 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV9-2A0A087WT02 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV9-2A0A087WT02 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.72■□□□□ 0.43
TRAV9-2A0A087WT02 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV9-2A0A087WT02 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TRAV9-2A0A087WT02 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TRAV9-2A0A087WT02 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV9-2A0A087WT02 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV9-2A0A087WT02 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TRAV9-2A0A087WT02 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.7■□□□□ 0.42
TRAV9-2A0A087WT02 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRAV9-2A0A087WT02 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV9-2A0A087WT02 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.69■□□□□ 0.42
TRAV9-2A0A087WT02 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV9-2A0A087WT02 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV9-2A0A087WT02 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRAV9-2A0A087WT02 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms