Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAV18A0A075B6X5 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRAV18A0A075B6X5 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRAV18A0A075B6X5 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
TRAV18A0A075B6X5 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV18A0A075B6X5 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAV18A0A075B6X5 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV18A0A075B6X5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV18A0A075B6X5 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAV18A0A075B6X5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAV18A0A075B6X5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV18A0A075B6X5 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV18A0A075B6X5 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAV18A0A075B6X5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAV18A0A075B6X5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TRAV18A0A075B6X5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRAV18A0A075B6X5 AC096887.2-201ENST00000623443 1957 ntBASIC20.64■□□□□ 0.89
TRAV18A0A075B6X5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV18A0A075B6X5 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.64■□□□□ 0.89
TRAV18A0A075B6X5 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV18A0A075B6X5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV18A0A075B6X5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV18A0A075B6X5 MIR3665-201ENST00000578708 105 ntBASIC20.62■□□□□ 0.89
TRAV18A0A075B6X5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV18A0A075B6X5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
TRAV18A0A075B6X5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV18A0A075B6X5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV18A0A075B6X5 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV18A0A075B6X5 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV18A0A075B6X5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV18A0A075B6X5 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV18A0A075B6X5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV18A0A075B6X5 AC133561.1-201ENST00000568600 2415 ntBASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV18A0A075B6X5 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms