Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 AC138932.3-201ENST00000567634 1902 ntBASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRBV20-1A0A075B6N2 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC16.18■□□□□ 0.18
TRBV20-1A0A075B6N2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRBV20-1A0A075B6N2 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 AC022211.4-201ENST00000625094 2161 ntBASIC16.16■□□□□ 0.18
TRBV20-1A0A075B6N2 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 AL117328.2-201ENST00000624617 1940 ntBASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRBV20-1A0A075B6N2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 AC010864.1-201ENST00000609407 1511 ntBASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRBV20-1A0A075B6N2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV20-1A0A075B6N2 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV20-1A0A075B6N2 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV20-1A0A075B6N2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV20-1A0A075B6N2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV20-1A0A075B6N2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV20-1A0A075B6N2 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV20-1A0A075B6N2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV20-1A0A075B6N2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV20-1A0A075B6N2 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 AP002414.2-202ENST00000590929 1450 ntBASIC16.1■□□□□ 0.17
TRBV20-1A0A075B6N2 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV20-1A0A075B6N2 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRBV20-1A0A075B6N2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms