Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAPPC1Q9Y5R8 CICP13-201ENST00000422015 2789 ntBASIC13.09□□□□□ -0.31
TRAPPC1Q9Y5R8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
TRAPPC1Q9Y5R8 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.08□□□□□ -0.31
TRAPPC1Q9Y5R8 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
TRAPPC1Q9Y5R8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
TRAPPC1Q9Y5R8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.08□□□□□ -0.31
TRAPPC1Q9Y5R8 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
TRAPPC1Q9Y5R8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 CNN2P6-201ENST00000439038 900 ntBASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 OR10C1-204ENST00000622521 1039 ntBASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 AC009949.1-201ENST00000623048 1830 ntBASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAPPC1Q9Y5R8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 AK1-201ENST00000223836 736 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 AL121829.2-201ENST00000620908 328 ntBASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 MTHFR-217ENST00000641820 1569 ntBASIC13.07□□□□□ -0.32
TRAPPC1Q9Y5R8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms