Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT52Q9Y366 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT52Q9Y366 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFT52Q9Y366 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IFT52Q9Y366 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
IFT52Q9Y366 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IFT52Q9Y366 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 AC116353.5-201ENST00000638148 1699 ntBASIC16.19■□□□□ 0.18
IFT52Q9Y366 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 AGGF1P2-201ENST00000426656 2106 ntBASIC16.19■□□□□ 0.18
IFT52Q9Y366 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IFT52Q9Y366 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.19■□□□□ 0.18
IFT52Q9Y366 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC246785.2-201ENST00000432512 513 ntBASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC111152.3-201ENST00000569699 673 ntBASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC109462.3-201ENST00000573934 613 ntBASIC16.18■□□□□ 0.18
IFT52Q9Y366 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AL138831.2-201ENST00000606564 490 ntBASIC16.18■□□□□ 0.18
IFT52Q9Y366 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.18■□□□□ 0.18
IFT52Q9Y366 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFT52Q9Y366 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.18■□□□□ 0.18
IFT52Q9Y366 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.17■□□□□ 0.18
IFT52Q9Y366 PCDHA14-201ENST00000506751 2298 ntBASIC16.17■□□□□ 0.18
IFT52Q9Y366 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFT52Q9Y366 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms