Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 DFFBP1-201ENST00000433250 979 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TEX28P1-201ENST00000613479 1221 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TEX28P2-201ENST00000617764 1221 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 WNT11-204ENST00000621122 789 ntTSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SNX29P1-201ENST00000548357 1007 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 MIR3909-201ENST00000579518 119 ntBASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
LRP1BQ9NZR2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AC046185.3-201ENST00000623228 1824 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 ANKRD19P-201ENST00000338192 862 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 LINC00896-202ENST00000609602 2128 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 IGHV3-52-201ENST00000519770 353 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 BANF1P1-201ENST00000553684 263 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 FST-202ENST00000396947 2538 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AC007541.1-201ENST00000570282 1469 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AC241585.1-201ENST00000433527 519 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 MIR4538-201ENST00000581377 78 ntBASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
LRP1BQ9NZR2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms