Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SALL1Q9NSC2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SALL1Q9NSC2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.64■□□□□ 0.9
SALL1Q9NSC2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SALL1Q9NSC2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SALL1Q9NSC2 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AL596442.2-201ENST00000610240 980 ntBASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 AC016396.2-201ENST00000562575 1417 ntBASIC20.64■□□□□ 0.89
SALL1Q9NSC2 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SALL1Q9NSC2 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 STOM-202ENST00000347359 870 ntTSL 2 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 CNN2P11-201ENST00000429351 262 ntBASIC20.63■□□□□ 0.89
SALL1Q9NSC2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 AL645728.2-201ENST00000641974 660 ntBASIC20.63■□□□□ 0.89
SALL1Q9NSC2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 AC092919.2-201ENST00000623631 1645 ntBASIC20.63■□□□□ 0.89
SALL1Q9NSC2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.63■□□□□ 0.89
SALL1Q9NSC2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 ADH5P3-201ENST00000433842 1137 ntBASIC20.62■□□□□ 0.89
SALL1Q9NSC2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 SNHG9-202ENST00000564014 471 ntBASIC20.62■□□□□ 0.89
SALL1Q9NSC2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.62■□□□□ 0.89
SALL1Q9NSC2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms