Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NECTIN3Q9NQS3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NECTIN3Q9NQS3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 REXO1L6P-202ENST00000619970 1078 ntBASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 AL691432.3-201ENST00000621860 400 ntBASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NECTIN3Q9NQS3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 NFIC-211ENST00000641145 8399 ntBASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.56■□□□□ 0.24
NECTIN3Q9NQS3 AP001269.4-201ENST00000609611 512 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms