Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HPS4Q9NQG7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HPS4Q9NQG7 AL590787.1-201ENST00000568856 1315 ntBASIC17.83■□□□□ 0.44
HPS4Q9NQG7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 AL031432.2-201ENST00000566714 459 ntBASIC17.83■□□□□ 0.44
HPS4Q9NQG7 AL928711.1-201ENST00000570165 459 ntBASIC17.83■□□□□ 0.44
HPS4Q9NQG7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HPS4Q9NQG7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 ACTG1P4-201ENST00000425123 1122 ntBASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CNN2P11-201ENST00000429351 262 ntBASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CEND1P1-201ENST00000451006 455 ntBASIC17.82■□□□□ 0.44
HPS4Q9NQG7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HPS4Q9NQG7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 AC025580.3-201ENST00000617932 1424 ntBASIC17.81■□□□□ 0.44
HPS4Q9NQG7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 PI4KAP1-204ENST00000612579 1703 ntBASIC17.81■□□□□ 0.44
HPS4Q9NQG7 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
HPS4Q9NQG7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms